ID A0A3D8YAY4_9BACT Unreviewed; 1138 AA.
AC A0A3D8YAY4;
DT 16-JAN-2019, integrated into UniProtKB/TrEMBL.
DT 16-JAN-2019, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=TonB-dependent receptor {ECO:0000313|EMBL:REA60925.1};
GN ORFNames=DSL64_13570 {ECO:0000313|EMBL:REA60925.1};
OS Dyadobacter luteus.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC Dyadobacter.
OX NCBI_TaxID=2259619 {ECO:0000313|EMBL:REA60925.1, ECO:0000313|Proteomes:UP000256373};
RN [1] {ECO:0000313|EMBL:REA60925.1, ECO:0000313|Proteomes:UP000256373}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RS19 {ECO:0000313|EMBL:REA60925.1,
RC ECO:0000313|Proteomes:UP000256373};
RA Chen L.;
RT "Dyadobacter roseus sp. nov., isolated from rose rhizosphere soil.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:REA60925.1}.
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DR EMBL; QNUL01000009; REA60925.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3D8YAY4; -.
DR Proteomes; UP000256373; Unassembled WGS sequence.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR011662; Secretin/TonB_short_N.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13715; CarbopepD_reg_2; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF07660; STN; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SMART; SM00965; STN; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Receptor {ECO:0000313|EMBL:REA60925.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000256373};
KW Signal {ECO:0000256|ARBA:ARBA00022729};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 74..125
FT /note="Secretin/TonB short N-terminal"
FT /evidence="ECO:0000259|SMART:SM00965"
SQ SEQUENCE 1138 AA; 123937 MW; 65B32E2D1CC12C8D CRC64;
MPSNPMKHFL HGKFSGMLNY LLCVVMLQCF AVSFAVAGSD QAQHLSLEEI YIQVSLKNIR
LEDALIKIGN QTQFSFAYNG ETLDKNKIVN LEFKSVSVAT LLRTLSKEAG LQFQRVDSQI
YIRKKRLLDA AVSEQFTQSA TVDVHGTIRD ERGEGLPGVN VVVKGTSVGT VSDANGKFQL
QITDQNTVLV ISSIGYLTQE VALGGQRSVT IDLRPDVKSL EELVVVGYGE QKRKELTGAV
VSVPKSVLEN NVMPTLDGLL GGSVAGLSAT QTSGQPGSGS SIRIRGGTSV NAKNDPLYVI
DGFIFYNDAS ANKTGLGAIE SSIDPLSSIN PADIESIEVL KDVSATAIYG SRGANGVIIV
TTKKGKRGET NINYRYTLGV GQSARKLDLM NASQWARLQK DYFNNKGRYT DEQISQLGQG
YNWQDAVLQT GLSQNHELSI SGGDDKTRYL ISGNLVDQKG IVINSGFKRS NARINLERDL
KPNLTVGLST IFGKNTQSSL TTTEPVNYNS SPFSAGITNS LTYALFIPPV VPIHASGGGY
NYSNPYEYAY FALGTKTTNP VSDLKNSVAQ TISNTLMANF FARYQILEGL IAKVSVGTSV
NNATQNFFAP SYTSLGLAEK GVGAVGNKRN EVLQTEYTLG YTKKLNDNHF IDVLAGYTYQ
QTQLGYATTI ASRFTNEDLK HNNLADGAVR YPPVTGSSKA RLNSLIGRVN YTLKQKYNLT
ATIRADNSSR FAEKYRWGYF PSIGLSWNVD EEEFLKNQNQ LTSLKLRAST GLVGNQEIGD
YEFAQTYTSG QYNGSASYSK NNLGNPNLRW ETTMQHNLGV DASFFSNRLG LVADIYYKKT
SDLLLNVPVN SSQGVIEQLV NVGHVTNKGV ELGITATLIQ GSGFNWAVAA NIARNINTIT
DMGTTKQLQQ GNSSQQILRV NNPLGSYYGL IFEGIVQTGD NVAELPKVGG STPSPGDLKF
ADISGSNGEK DGVVDSYDRT IIGNSQPDFT YGLSTTLTYK NFDLFALFQG SQGAQLFNGL
RRTLEQPNDS YNVLTSVLDS WTESNPSNYL PRITGTRPFA YIDSRYVENA SYLKMKNLTL
GYNIKLKGGQ LKMRVFASAN NLLRITSYKG YDPEVSSGLD IGSYPSARTF LAGVAISF
//