ID   A0A3D9T1P6_9ACTN        Unreviewed;       403 AA.
AC   A0A3D9T1P6;
DT   16-JAN-2019, integrated into UniProtKB/TrEMBL.
DT   16-JAN-2019, sequence version 1.
DT   27-MAR-2024, entry version 18.
DE   SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:REF00771.1};
GN   ORFNames=DFJ69_6352 {ECO:0000313|EMBL:REF00771.1};
OS   Thermomonospora umbrina.
OC   Bacteria; Actinomycetota; Actinomycetes; Streptosporangiales;
OC   Thermomonosporaceae; Thermomonospora.
OX   NCBI_TaxID=111806 {ECO:0000313|EMBL:REF00771.1, ECO:0000313|Proteomes:UP000256661};
RN   [1] {ECO:0000313|EMBL:REF00771.1, ECO:0000313|Proteomes:UP000256661}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 43927 {ECO:0000313|EMBL:REF00771.1,
RC   ECO:0000313|Proteomes:UP000256661};
RA   Klenk H.-P.;
RT   "Sequencing the genomes of 1000 actinobacteria strains.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:REF00771.1}.
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DR   EMBL; QTTT01000001; REF00771.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3D9T1P6; -.
DR   OrthoDB; 4137935at2; -.
DR   Proteomes; UP000256661; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   CDD; cd00397; DNA_BRE_C; 1.
DR   Gene3D; 1.10.150.130; -; 1.
DR   Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR   InterPro; IPR044068; CB.
DR   InterPro; IPR011010; DNA_brk_join_enz.
DR   InterPro; IPR013762; Integrase-like_cat_sf.
DR   InterPro; IPR002104; Integrase_catalytic.
DR   InterPro; IPR010998; Integrase_recombinase_N.
DR   InterPro; IPR004107; Integrase_SAM-like_N.
DR   Pfam; PF02899; Phage_int_SAM_1; 1.
DR   Pfam; PF00589; Phage_integrase; 1.
DR   SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR   SUPFAM; SSF47823; lambda integrase-like, N-terminal domain; 1.
DR   PROSITE; PS51900; CB; 1.
DR   PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE   4: Predicted;
KW   DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000256661}.
FT   DOMAIN          61..148
FT                   /note="Core-binding (CB)"
FT                   /evidence="ECO:0000259|PROSITE:PS51900"
FT   DOMAIN          174..379
FT                   /note="Tyr recombinase"
FT                   /evidence="ECO:0000259|PROSITE:PS51898"
FT   REGION          1..38
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          276..304
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   403 AA;  43757 MW;  A7FCCB99008ECE85 CRC64;
     MSDSENPGSY GHLTERTRPP AAAHHVPSPV AASTRPERSD PFVEAVAMLP ALPIDEDGGR
     YGLRTLTAAW LRGQNSDATR RAYYQDLAGW LAHCAHAGLD PLTARRADVD DWTVTMTAAV
     RGGGSRPAGA ATKARRLAAV SSWYRYLQSN DAAERNPTLL VKRPTSAEIE AASRRAPTLG
     VQETAALLDA AESRAHREDT EAAWRDAAVI ALLFYTALRV SAITGADIAD LTTEAGYRIL
     RHGLKGRGPA GRGYVRLDGE LTRVLDLYLE ARSRRHPDGV RPAGPLVVTT PHPHDPGKPG
     DKRLTQRDVT NILRRHAHRA GLPAAARLTP HSGRRTVITT LLGNDVPLAK VQDLAGHADP
     RTTRRYDDTN HKLAASPVTD LTRILAKHRN PEQRLPGDRP TDD
//