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Database: UniProt
Entry: A0A3D9T352_9ACTN
LinkDB: A0A3D9T352_9ACTN
Original site: A0A3D9T352_9ACTN 
ID   A0A3D9T352_9ACTN        Unreviewed;       293 AA.
AC   A0A3D9T352;
DT   16-JAN-2019, integrated into UniProtKB/TrEMBL.
DT   16-JAN-2019, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   SubName: Full=RNA polymerase sigma-70 factor (ECF subfamily) {ECO:0000313|EMBL:REF00804.1};
GN   ORFNames=DFJ69_6386 {ECO:0000313|EMBL:REF00804.1};
OS   Thermomonospora umbrina.
OC   Bacteria; Actinomycetota; Actinomycetes; Streptosporangiales;
OC   Thermomonosporaceae; Thermomonospora.
OX   NCBI_TaxID=111806 {ECO:0000313|EMBL:REF00804.1, ECO:0000313|Proteomes:UP000256661};
RN   [1] {ECO:0000313|EMBL:REF00804.1, ECO:0000313|Proteomes:UP000256661}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 43927 {ECO:0000313|EMBL:REF00804.1,
RC   ECO:0000313|Proteomes:UP000256661};
RA   Klenk H.-P.;
RT   "Sequencing the genomes of 1000 actinobacteria strains.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBUNIT: Interacts transiently with the RNA polymerase catalytic core
CC       formed by RpoA, RpoB, RpoC and RpoZ (2 alpha, 1 beta, 1 beta' and 1
CC       omega subunit) to form the RNA polymerase holoenzyme that can initiate
CC       transcription. {ECO:0000256|ARBA:ARBA00011344}.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:REF00804.1}.
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DR   EMBL; QTTT01000001; REF00804.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3D9T352; -.
DR   Proteomes; UP000256661; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 3.10.450.50; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR032710; NTF2-like_dom_sf.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR014303; RNA_pol_sigma-70_ECF.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   NCBIfam; TIGR02957; SigX4; 1.
DR   PANTHER; PTHR30173:SF36; ECF-FAMILY RNA POLYMERASE SIGMA FACTOR-RELATED; 1.
DR   PANTHER; PTHR30173; SIGMA 19 FACTOR; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF54427; NTF2-like; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000256661};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          15..78
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          109..160
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
SQ   SEQUENCE   293 AA;  32247 MW;  D7F71E11CA3FA589 CRC64;
     MSDRAGDTAT EAFIAHRNLL FTVAYEMLGS AADAEDALQE TWLRWADVDH DTVRDQRAYL
     VRITTRQALS RLRTLRRRKE SYVGPWLPEP LLTAPDVAED AELADSVSMA MLLVMETLTP
     TERAVFVLRE VFELEYDEIA EAVDKNLAAV RQIAHRARAH VAARRPRGMV SPAENRGALE
     AFQRAIETGD LQRLLDILAP DVVLLGDGGG VVRAALEPVV GADTVAHVLG RIAPAASLHP
     AQVNGHPALI LRLDGEIDTV MAVRFDDGLI TGLYAVRNPE KLSHMARETA LRR
//
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