ID   A0A3E0X1G6_9GAMM        Unreviewed;       771 AA.
AC   A0A3E0X1G6;
DT   16-JAN-2019, integrated into UniProtKB/TrEMBL.
DT   16-JAN-2019, sequence version 1.
DT   24-JAN-2024, entry version 13.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   ORFNames=CAL65_01270 {ECO:0000313|EMBL:RFA39451.1};
OS   Alkalilimnicola ehrlichii.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
OC   Ectothiorhodospiraceae; Alkalilimnicola.
OX   NCBI_TaxID=351052 {ECO:0000313|EMBL:RFA39451.1, ECO:0000313|Proteomes:UP000256763};
RN   [1] {ECO:0000313|Proteomes:UP000256763}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AK93 {ECO:0000313|Proteomes:UP000256763};
RA   Sharma S., Sidhu C., Pinnaka A.K.;
RL   Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Together with LptE, is involved in the assembly of
CC       lipopolysaccharide (LPS) at the surface of the outer membrane.
CC       {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. Interacts with LptE and LptA. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RFA39451.1}.
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DR   EMBL; NFZW01000001; RFA39451.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3E0X1G6; -.
DR   Proteomes; UP000256763; Unassembled WGS sequence.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   Gene3D; 2.60.450.10; Lipopolysaccharide (LPS) transport protein A like domain; 1.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR045659; LptD_2.
DR   InterPro; IPR007543; LptD_C.
DR   InterPro; IPR005653; OstA-like_N.
DR   PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR   PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR   Pfam; PF04453; LptD; 1.
DR   Pfam; PF19838; LptD_2; 1.
DR   Pfam; PF03968; LptD_N; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|ARBA:ARBA00023237, ECO:0000256|HAMAP-
KW   Rule:MF_01411};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01411};
KW   Reference proteome {ECO:0000313|Proteomes:UP000256763};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT   SIGNAL          1..46
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT   CHAIN           47..771
FT                   /note="LPS-assembly protein LptD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT                   /id="PRO_5017840258"
FT   DOMAIN          82..215
FT                   /note="Organic solvent tolerance-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03968"
FT   DOMAIN          221..297
FT                   /note="LPS-assembly protein LptD central"
FT                   /evidence="ECO:0000259|Pfam:PF19838"
FT   DOMAIN          321..690
FT                   /note="LptD C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF04453"
SQ   SEQUENCE   771 AA;  88162 MW;  A522717FD26D45D7 CRC64;
     MHFIFCEMVS AAADTGKSPV YRKSSLTRIA LLSAMLAGVA PVLAHAENND LPFDPALCGG
     PISTQPDPAN LAAREDPATP VTIDADRVDY FGATQSYRFA GNVLLQQADQ QLQADRIVFN
     QETSRADASG NLRYYEDGLT LWAEEGHLYF DVTRGALSTA RFQFEHSYTH GDADEIIIED
     SQRSRYRDVR FTTCPPDRTD WWLRGSELRT DREEGMGSAR HAWLQFMGVP LFYTPYISFP
     IDDRRRSGLL APSYRQSSRS GFDLRIPYYW NMAPNYDAVL APRIVTRRGL MLDTEWRLLT
     RQFAAETDLQ YLPDDDLYGD DRWLASLRME SPEERAIQWE LDLNRVSDED YLRDFGSGIA
     SSSVSHLPSL AIASYQTLDL RVSAQAQTWQ TLDQEVSSPY RILPRVRVDY NPAPIAAGLD
     YRLESELTYF DHANPSARDT GVRAHVVPTL SRTWDGLAYF ITPSFAVSHT EYWLDRPDNS
     AAENPSSTIP IFSVEAGIFL ERDFALGNRA LMQTLEPRLF YLYVPEYDQS DQPRFDTRDS
     ELTLGQLFRT NRFTGPDRQG DANQVSAALT SRVVDRQSGR EHLSASVGQI FYLEDREVTI
     NDALEDPTRN SSDIMAELRS QLPGGFNVFA DYRWDPYDNR TRRSGLRLQY RPQPDAVINL
     GYRSRTERDS GSRELEQTDL SFVWPIGARW HAIGGWRYSL LDNETLEQFA GFEFDNCCWS
     FRLLAREYVR DLDREPEREV MFQLEFTGLA DVGRSVQDFM IDAVTGYRPR R
//