ID A0A3E1NMW1_9BACT Unreviewed; 558 AA.
AC A0A3E1NMW1;
DT 16-JAN-2019, integrated into UniProtKB/TrEMBL.
DT 16-JAN-2019, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE SubName: Full=DNA polymerase/3'-5' exonuclease PolX {ECO:0000313|EMBL:RFM29148.1};
GN ORFNames=DXN05_07905 {ECO:0000313|EMBL:RFM29148.1};
OS Deminuibacter soli.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Deminuibacter.
OX NCBI_TaxID=2291815 {ECO:0000313|EMBL:RFM29148.1, ECO:0000313|Proteomes:UP000261284};
RN [1] {ECO:0000313|EMBL:RFM29148.1, ECO:0000313|Proteomes:UP000261284}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K23C18032701 {ECO:0000313|EMBL:RFM29148.1,
RC ECO:0000313|Proteomes:UP000261284};
RA Wang C.;
RT "Chitinophagaceae sp. K23C18032701, a novel bacterium isolated from forest
RT soil.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RFM29148.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; QTJU01000002; RFM29148.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3E1NMW1; -.
DR OrthoDB; 9808747at2; -.
DR Proteomes; UP000261284; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR CDD; cd07436; PHP_PolX; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 1.10.150.110; DNA polymerase beta, N-terminal domain-like; 1.
DR Gene3D; 3.20.20.140; Metal-dependent hydrolases; 1.
DR InterPro; IPR002054; DNA-dir_DNA_pol_X.
DR InterPro; IPR010996; DNA_pol_b-like_N.
DR InterPro; IPR027421; DNA_pol_lamdba_lyase_dom_sf.
DR InterPro; IPR004013; PHP_dom.
DR InterPro; IPR003141; Pol/His_phosphatase_N.
DR InterPro; IPR016195; Pol/histidinol_Pase-like.
DR InterPro; IPR022311; PolX-like.
DR InterPro; IPR047967; PolX_PHP.
DR PANTHER; PTHR36928; PHOSPHATASE YCDX-RELATED; 1.
DR PANTHER; PTHR36928:SF1; PHOSPHATASE YCDX-RELATED; 1.
DR Pfam; PF14520; HHH_5; 1.
DR Pfam; PF14716; HHH_8; 1.
DR Pfam; PF02811; PHP; 1.
DR PIRSF; PIRSF005047; UCP005047_YshC; 2.
DR SMART; SM00481; POLIIIAc; 1.
DR SMART; SM00483; POLXc; 1.
DR SUPFAM; SSF47802; DNA polymerase beta, N-terminal domain-like; 1.
DR SUPFAM; SSF89550; PHP domain-like; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000313|EMBL:RFM29148.1};
KW Hydrolase {ECO:0000313|EMBL:RFM29148.1};
KW Nuclease {ECO:0000313|EMBL:RFM29148.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000261284}.
FT DOMAIN 1..296
FT /note="DNA-directed DNA polymerase X"
FT /evidence="ECO:0000259|SMART:SM00483"
FT DOMAIN 320..399
FT /note="Polymerase/histidinol phosphatase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00481"
SQ SEQUENCE 558 AA; 62368 MW; 00197A376EBC935A CRC64;
MDNYAIADNF TLLSKLMDIH GENSFKSKSY ASAAYTIEKL PAQLADLPAD KISSIKGIGD
AIAAKIQEQL NTGQLTLLTE MIARTPSGVV EMLHIKGLGP KKIATVWKDL EVENIGELLY
ACNENRLLLY KGFGAKTQQN IKESIEFYLG NQGSYLYAQI APYAQALTTK LQQHFTEHHT
LLTGDLRRHI EVITRLQWIT TIDPGQLQLY LTEGDYAFIS TVNNTSTFKG KENEILEFTH
TSAEKLYYDW FCGSCSETFL EAWTSNYQPA ADIIFTTEEA IFEHAGIAYI PPYLRESANI
LDKAKTRSLP DVIVPSDITA IIHSHSKWSD GVNTIEEMAK AAIAKDLQFL VLSDHSKTAF
YANGLNEERL LAQHEEIDAL NQKYAPFKIF KSIESDILND GSLDYAPDVL ASFDVVIASV
HANLKMNQEK AMMRLLRAIE NPYTSILGHM TGRLLLSRNG YPVDHAVIID ACAANNVVIE
INAHPRRLDI DWRWVELALE KGVLLSINPD AHSVDGYDDV KYGVLAGQKG GLQKHQNLSS
FSLEAFEAFV SKQQAKRR
//
