ID A0A3G8JKG9_9ACTN Unreviewed; 783 AA.
AC A0A3G8JKG9;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=30S ribosomal protein S1 {ECO:0000313|EMBL:AZG44700.1};
GN Name=ypfD {ECO:0000313|EMBL:AZG44700.1};
GN ORFNames=D7316_01286 {ECO:0000313|EMBL:AZG44700.1};
OS Gordonia insulae.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Gordoniaceae;
OC Gordonia.
OX NCBI_TaxID=2420509 {ECO:0000313|EMBL:AZG44700.1, ECO:0000313|Proteomes:UP000271469};
RN [1] {ECO:0000313|EMBL:AZG44700.1, ECO:0000313|Proteomes:UP000271469}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MMS17-SY073 {ECO:0000313|EMBL:AZG44700.1,
RC ECO:0000313|Proteomes:UP000271469};
RA Kim Y.S., Kim S.B.;
RT "Gordonia insulae sp. nov., isolated from an island soil.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP033972; AZG44700.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3G8JKG9; -.
DR KEGG; gom:D7316_01286; -.
DR Proteomes; UP000271469; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000271469};
KW Ribonucleoprotein {ECO:0000313|EMBL:AZG44700.1};
KW Ribosomal protein {ECO:0000313|EMBL:AZG44700.1}.
FT DOMAIN 649..718
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 721..783
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 721..764
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 783 AA; 83836 MW; 06E744D412EEB955 CRC64;
MKSVNTRIAE ELSVGEGQVA AAVRLLDEGS TVPFIARYRK EVTGSLDDAQ LRTLDERLRY
LRELDDRRDA VLASIEEQGK LTDDLRAALL AAETKARIED IYLPYKPKRR TKAQIAREAG
LEPLADRLLD DPSVVPDDVA AGFVGENVAD AAAALDGARQ ILVERAAEDA ELVGAIRERF
WAGASMRTAP RSEAAAATPA AQKFRDYFEF SEPVESMPSH RVLAVLRGEK EEALTLTLDG
GEDDAYEAMV AATLGIDGSH PGPATPWLVG TARWAWRTKL MVSASIEARV RLRQRAEADA
VAVFATNLKD LLLAAPAGTR ATLGLDPGFR TGVKVAVVDG TGKVLDTCAI YPHQPQKQWD
QAKATLAALV ARHDVELVAI GNGTASRETD ALATELVNDI RAAGARVPAK AIVSEAGASV
YSASEYASKE LPQLDVSLRG AVSIARRLQD PLAELVKIDP KSIGVGQYQH DVTPGTLARS
LDAVVEDAVN AVGVDLNTAS VPLLSRVSGV TPALASAIVA HRDQAGPFRS RKGLLDVARL
GPKAFEQCAG FLRIRDGEDP LDSSGVHPEA YPVVRRILDR SGLAITELIG DSRTLRGLRP
ADFADDRFGL PTVTDIFAEL EKPGRDPRPA FATATFAAGV EKVADLEPGM VLEGVVTNVA
AFGAFVDVGV HQDGLVHVSA MSDRFVSDPH EVVRSGQVVR VKVVDVDVER QRIGLTLRLD
DETRSAKRGP GKDRGETRTP ARGPKGGDRN ARSQNGRRDS GRTQRDQPSG SMAQALRDAG
FGR
//