ID A0A3L6PBB2_PANMI Unreviewed; 1380 AA.
AC A0A3L6PBB2;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE RecName: Full=Transcription initiation factor TFIID subunit 2 {ECO:0000256|ARBA:ARBA00017363};
GN ORFNames=C2845_PMPSC040778 {ECO:0000313|EMBL:RLM53139.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLM53139.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF2 family.
CC {ECO:0000256|ARBA:ARBA00010937}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLM53139.1}.
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DR EMBL; PQIB02000023; RLM53139.1; -; Genomic_DNA.
DR STRING; 4540.A0A3L6PBB2; -.
DR Proteomes; UP000275267; Unassembled WGS sequence.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0008237; F:metallopeptidase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd09839; M1_like_TAF2; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR Gene3D; 1.10.390.10; Neutral Protease Domain 2; 1.
DR Gene3D; 2.60.40.1730; tricorn interacting facor f3 domain; 1.
DR InterPro; IPR042097; Aminopeptidase_N-like_N_sf.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR014782; Peptidase_M1_dom.
DR InterPro; IPR027268; Peptidase_M4/M1_CTD_sf.
DR InterPro; IPR037813; TAF2.
DR PANTHER; PTHR15137; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR PANTHER; PTHR15137:SF9; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 2; 1.
DR Pfam; PF01433; Peptidase_M1; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF63737; Leukotriene A4 hydrolase N-terminal domain; 1.
DR SUPFAM; SSF55486; Metalloproteases ('zincins'), catalytic domain; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 335..532
FT /note="Peptidase M1 membrane alanine aminopeptidase"
FT /evidence="ECO:0000259|Pfam:PF01433"
FT REGION 130..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 170..190
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 579..598
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1052..1091
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1110..1134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1228..1380
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 171..190
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1112..1126
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1257..1304
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1337..1357
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1380 AA; 153113 MW; A1F7F036A92F3717 CRC64;
MAKARKQKGD GGGSGGGATV LHQKLCVSID MENQLIYGYT EIKVLLADND TFALHADNMT
IRSILVDGET AEFDYSPHWK NECDQPNWSS ISCLKTAADA ACSTYTSALN REAVPNLIVS
YERSVKSITE QQLEENSEKH EENSGRLEEH GLKPVQASDN QIVNGCNGSA VEEQKEKENG
NEKGKENGIE TENEKVKNIK LVHIDYILEK AETGIHFVGN VLHSSSQIRR AHCWFPCIDS
TTQRCPFDLE FTVSMDLIAV SNGDLLHQVL SKEDPTKKTY VYKLNTPVSA QWISLVVGPL
EVLPDSNDTS VSHICLSPAL SKLQNTIAFF HDAYSCYEDY LATPFPLGLY KQIFLPPEMT
VLPTSLGAST CIFSSDILHD EKVIDQIIGT RIKLTYALAK QWFGIYTSAE EPNDEWLLDG
LAGFLTEIFI KRFLGNNEAR YRRFKANSTV CESDVSGATA LSSPAASSDL YGTQTIGSYG
KVRSLKAVAV LQMLEKQMGP DSFRKILQVI VAPNRASRTL STKEFRHLAN KVGNLERPFL
KEFFPRWVES CGCPVMRLGI SYSKKRNMIE LAVSRGCTAK ATPDSDSHTN GDIREGDAGW
PGMMSVRVHE TDGAYDHPVL PMAGEALQVV EIQCHSKLAA KRVWKSKKST KFDGSDDNID
VSTQENRTSI DSPLQWIRVD PEMEYLAEIH FHQPVQMWIN QLEKDKDVIS QSQAISVLEK
LPQLSSAVIN ALNNFLNDTK AFWRVRVEAA YALAVTASEA TDLAGLLHLV KFYKSRRFDA
DIGMPRPNDF HDIPEYFVLE AIPHAVALVR SSDKNSPKGA IEFILQLLKY NDNNGNIYSD
VYWLSAMVQS IGELELGQQG VGFLSSLLKR IDRLLQFDNF MPGYNGVLTV SCIRTLARIA
RRVSSSICLD RICELIAPFR NMDKPWKVRI EASRVLIDLE LHHKGLDAAL LLFLKYVDEE
KSLRGATKLA VHVLRLCQAS TVPHFNDHIS LTTLIGLLHL LAGAKAYNNV FLRHHVFCIV
QVAAGRSPTL FGVPKVVTPA LVAQDICSDQ HTKADSSIPQ PSRPQEPSTS TPSVREVLPT
SGPTKDADNI SNCSERRNVV KIRVKLTASS SKASDADHRV HCHGGRNENE AGPCSSMSVD
APMVGAATEP LNVSNHNIEE QNSCHDHESR MSASVGNAKL MDRHEISKEL QCTADSRLDV
LPKDQFSPAV NPLGVVDKPG SQLEVVSTSY DGNQAPESVS GVETKERKKK DKKDKKRKRD
EKRDKKDDPE YLEKKRLKKE KKKMEKESAR KQLEGEEKAT LEQRKIVKPS GLQEVLPARP
PTAPVRSAEP APSQSAEPAA VRSSEPQISS KETTVDTART AAKPRIKIKV KPLLRKPEGS
//
