ID A0A3L6QBN3_PANMI Unreviewed; 1484 AA.
AC A0A3L6QBN3;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=PHD finger family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=C2845_PM12G28250 {ECO:0000313|EMBL:RLM78054.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLM78054.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLM78054.1}.
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DR EMBL; PQIB02000012; RLM78054.1; -; Genomic_DNA.
DR STRING; 4540.A0A3L6QBN3; -.
DR Proteomes; UP000275267; Chromosome 12.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15571; ePHD; 2.
DR CDD; cd15492; PHD_BRPF_JADE_like; 1.
DR CDD; cd15489; PHD_SF; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 4.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13793:SF107; PHD FINGER FAMILY PROTEIN; 1.
DR PANTHER; PTHR13793; PHD FINGER PROTEINS; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 2.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS51805; EPHD; 2.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Transferase {ECO:0000256|ARBA:ARBA00022603};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 285..336
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 347..471
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT DOMAIN 1084..1133
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 1155..1264
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT REGION 58..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 481..504
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 881..911
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1023..1066
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1401..1484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 59..73
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 881..909
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1417..1437
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1439..1453
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1469..1484
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1484 AA; 164291 MW; 406E9670AE41754A CRC64;
MSGEMARAEV SPEGAAPGFG ADLYAQATKA LALRTPFEGE EAASRVPTLP ARLVSWAGPG
DARKKHKKIQ LPPPDDATVE PPPQPAAKVG LWEQFEAYFR PVTLADVEML KPKLPFGYNN
LDSCMLIPFL GSGKELVNQA ETYDVAVAET SSYLGVGGAE VVSNRERGEQ SVHLLSQKEK
RDQSVDPDIH DVVVQQMVSD KDLSRRSRVS VQPGERPFEV DQAGRNGIVS AQCVEEEESS
LNWLLGATGR FVLTSERPNK KRKLLGVDAG LEQLVLLPRL GAEKSSSCDV CCLGESSMDS
NRIVNCSNCK VSVHQKCYGL RVVPDGQWLC AWCTYLESNK DSGSTQSTPC VLCPKEKGAL
KPVEVEPTRN ADVSHLKFVH LFCSLWAPEV FVEDMESMEP VTNLDSVLEN RMKLTCSICK
IKHGACVRCS HGTCRAAFHP ICARESKHQM EIWGKSKHSN VELRAFCSKH SAVGYTSLVK
NSNHASEQSP TESGPNTTNL ITGKIPKLRF TRKNKDKFMN SETSASSSGN LIRVETIEQD
TLAYTVRNAN AQPIRSWETD TGHPSGGGDR MRSSGDIAVV LRKLIDSGKV SVGDIASEVG
ISSESLEAAL VGETTTFSHG LMLKIIKWLQ NSVHIHTVQG NARKGNSVVL QDNNSDGSDT
TDTVDTKIPL VPADDKEPFV DMSDYAVTEP TLTRSKSNSK ILEGDNTTCA TGVTILQNGN
KNMVKEWVDI ESSPAKEFAK ESTREFSPIG SNGVSKEEKG KLILNNTCGN KEFGTSMEIP
NENRGVLLGR KSDNLIEAGL GSDSKEGVSS LDHCFAQGDH ARDGENSIEN SSVTPRDCDS
SCSHGQPFFN FDDSHSYIHP FIKKKISHHW DITFNQNKEA LHHHEEHSCP HEKRPVDSFE
EHEDATDTTT SDQVLKAKSL RVLEHAPDDE VEGEMVYLQA RLLDNAVVLK HRYEKLIAKV
VQNLSRELDA FSRRKWDLIF VNQFLRDVRE AKKRGRKEKR HKEAQAVLAA AAAAVASSSR
NSIMRKDAKE DAAPANQENS PKLVAGSSRV GQRIKDSLKS SNSKVPPDNK FGSFHMPISS
NENALYCDVC MRTETVLNRI FICFRCKAAV HIDCYRNMEN SIGPWKCELC EDQDISLETS
TASDKSDCNG KKLHFARCGM CHGTSGAFRK TADGQWVHAF CAEWLLDTKY VRGQENPVEG
MESLVEGKDT CCLCLRKAGM CLRCSSGDCH ITFHPTCARN SGFYMNTKGF GTTSQHKAYC
AKHSAQQKED DAQRYGPEEL RNMKRMRVEL EKLRLLCERV IKREKVKRET VLCDHDIIAK
TKDTVVFSYL ACGASSESAT TSVNNRSYSG TAQRSDDVTV DSTISGKKTI RFSLNSRDAE
RNTADSSRTL ISFKRKLSER GLHAGKQLPQ RPAITSQKLE DGEKKTNDKK REMFQKELVM
TSDQASTQNQ RLPKGYVYVP RDSLSKERPW NRNTQPHTPQ EPGG
//
