ID A0A3L6QG06_PANMI Unreviewed; 1045 AA.
AC A0A3L6QG06;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=RNA-binding protein 5-A isoform X1 {ECO:0000313|EMBL:RLM78675.1};
GN ORFNames=C2845_PM12G03810 {ECO:0000313|EMBL:RLM78675.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLM78675.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLM78675.1}.
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DR EMBL; PQIB02000012; RLM78675.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3L6QG06; -.
DR STRING; 4540.A0A3L6QG06; -.
DR Proteomes; UP000275267; Chromosome 12.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd16166; OCRE_SUA_like; 1.
DR CDD; cd12313; RRM1_RRM2_RBM5_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 1.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR041591; OCRE.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR035623; SUA-like_OCRE.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR13948:SF3; FI21118P1; 1.
DR PANTHER; PTHR13948; RNA-BINDING PROTEIN; 1.
DR Pfam; PF01585; G-patch; 1.
DR Pfam; PF17780; OCRE; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00360; RRM; 2.
DR SMART; SM00547; ZnF_RBZ; 1.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
DR PROSITE; PS50199; ZF_RANBP2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 283..380
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 403..436
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 448..528
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 969..1015
FT /note="G-patch"
FT /evidence="ECO:0000259|PROSITE:PS50174"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 69..107
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 155..258
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 564..585
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 742..786
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 877..953
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 32..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..107
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..238
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 755..786
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 877..891
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 910..930
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1045 AA; 116119 MW; F69571A61826DB69 CRC64;
MDHGRYAPHH GWENNSAPDG YGVINEPDYR ADGSYNGRRP VDEGFSRDSY GRGAYYQDVH
DRNMYPPPAS VGAMWSQPRR NHDEEYATAR DHRRHDTDYR NDGKHHEFDS YRGVDKLRDN
YHAADNYYES GSHLDFGVDR SKRIGSGERA EFHGEFEDRY RSSHQSREDS YERNHEYGRH
SYDSDYERGR RDSSWRRRDS CEGEHERRGL SRERDESPYM RHSRSRSRGR DDRSRSRSRS
RSPRARSRGR NQRDGFYDDN RFDRRREYDW DERRRGDSVA PSATVVVKGL SLKTNDDDLY
QILVQVPLHK LLHWLKVYCL AQWGPLRSAR VIKERNSGMS RGFAFIDFHT VEAARRMMEG
TAENGLEIDG RNVFFEYSSK PTGGMGGPSL GQENFTRPTY GHRTAAAPCD WICTICGCMN
FARRTSCFQC NEPRTEDALP ADATGPTHVL VVRGLDENAD EEMLRYEFAK HAPIKDIRLV
RDKFTHVSRG FAFVHFHSVE DATKALEATN GITLEKNGQV LRVAYAKSTH GPASGGSQSN
SLAAAAIEAA SFAQQYDAIG WAPKEYNPDE KQSSNSETQK DGSAAQSGFV WDEKSGYYYD
SASGFYYDGN TGLYYDSNSG VWYSFDQQTQ QYVPCDQNNT KAAGVVANEN TKTSESNSGK
KVVISAPAAT IKQSEKTSLP DAVQAAANAA LAAEKREKEK AKEIKLASKS SLIANKKKMN
NVLAMWKQRN QEGQAARIVL DDKELSRSDD KSNHSHSGTG FSLKSKPNSD SGNAKDMNSS
ANYNSFGQGT ASAQMLDSDV KPRPVSNSLG TTVMGVIRGS ARGVIKSDTT FHALSDTGSA
EPRTTVTTST KGLMTTPEAL ATPAPFKTDI SALVSNTSSG VSGSGKRRFS EAPAQSQYRD
RAAERRNLYG SSLGNDSVGL DSTGDYPSRK GSSELGSMPF PPGVGERSSG EIGNTENYEV
ITADRAIDES NVGNRILRNM GWQEGLGLGK DGSGIKEPVQ AKSVDVRAGL GSQQRKADPS
LEAQAGDSYK TIIQKKAIAR FREMS
//
