ID A0A3L6QZD0_PANMI Unreviewed; 745 AA.
AC A0A3L6QZD0;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Homeobox-leucine zipper protein TF1 {ECO:0000313|EMBL:RLM92058.1};
GN ORFNames=C2845_PM08G27920 {ECO:0000313|EMBL:RLM92058.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLM92058.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC {ECO:0000256|ARBA:ARBA00006789}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLM92058.1}.
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DR EMBL; PQIB02000010; RLM92058.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3L6QZD0; -.
DR STRING; 4540.A0A3L6QZD0; -.
DR Proteomes; UP000275267; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR CDD; cd08875; START_ArGLABRA2_like; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR002913; START_lipid-bd_dom.
DR PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR PANTHER; PTHR45654:SF2; HOMEOBOX-LEUCINE ZIPPER PROTEIN TF1; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF01852; START; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00234; START; 1.
DR SUPFAM; SSF55961; Bet v1-like; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS50848; START; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 99..159
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 253..482
FT /note="START"
FT /evidence="ECO:0000259|PROSITE:PS50848"
FT DNA_BIND 101..160
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 82..102
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 168..227
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 17..55
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 745 AA; 80840 MW; 29DC62A8D992256C CRC64;
MGIDEPSGGH PCFMESTSDI GDSSLIGPPS SIVVGLSSNR NETSEKNSSS YFGELHGNNG
HGEIPGDGVS GINEVNLSIL VSNKNGSGKS PGDGQDGPKP KKRCLRRLTS RQAEILEGFF
SVCAHPDENQ RIQLAAMTGL GLHQVKFWFQ NKRTHVKHLS GKEENCRLKV ENEMLREEND
MFKQAQNNAL CPRCTNDPGF LQILKELEQV KAHNQMLQQE LQQMRIDNEA RLTMRPPIRV
FHLEPSSGNA FGMQDEVQAL TEVAKSAAHE LFILSDSSSP LWLAVPGGSF QVLNRMAYAQ
MFPGQMGVGT IGLTAEATRA SAVVMLDPKS IVEFLMDSGS FGAFFPGLMS GAATSTKVYN
WPQNSEAGYD GAMQLLTVEM VFPSPLVPAR KCTFLRYCKR LELGAMAVVD VSLDDGAKCQ
KMPSGILIQP IRHNSCKVTA IEHVRVDGSG THELFQACLS GLLFGARRWV MSMARQSARL
RDVFHVTNCT LDVTSRGRKA IMKLADNLLA NYTGSIAGLP ADAWSVQCGE GTEEDVKIAY
RRNDDGSNTA IVCTSATFLL PLPMRRVFDL LKSNLLRVKW DVLVNGGCVK EVVRVANGVG
IEDAVSILHV KHGSGANKET MMILQNSCYD ASGSFMVYSS LDKHVMEMIT SPGGEEAMSN
IALFPAGFSL VPLADPANAG CPIGEAGGTV MTAGFQILMK LARGTGLCPR SVSSAIKIMT
EHIETIKDTL QNSHPVFYKT IQSPN
//