GenomeNet

Database: UniProt
Entry: A0A3L6QZD0_PANMI
LinkDB: A0A3L6QZD0_PANMI
Original site: A0A3L6QZD0_PANMI 
ID   A0A3L6QZD0_PANMI        Unreviewed;       745 AA.
AC   A0A3L6QZD0;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   SubName: Full=Homeobox-leucine zipper protein TF1 {ECO:0000313|EMBL:RLM92058.1};
GN   ORFNames=C2845_PM08G27920 {ECO:0000313|EMBL:RLM92058.1};
OS   Panicum miliaceum (Proso millet) (Broomcorn millet).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX   NCBI_TaxID=4540 {ECO:0000313|EMBL:RLM92058.1, ECO:0000313|Proteomes:UP000275267};
RN   [1] {ECO:0000313|Proteomes:UP000275267}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA   Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA   Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA   Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT   "The genome of broomcorn millet.";
RL   Nat. Commun. 10:436-436(2019).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC   -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class IV subfamily.
CC       {ECO:0000256|ARBA:ARBA00006789}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RLM92058.1}.
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DR   EMBL; PQIB02000010; RLM92058.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3L6QZD0; -.
DR   STRING; 4540.A0A3L6QZD0; -.
DR   Proteomes; UP000275267; Chromosome 8.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR   GO; GO:0008289; F:lipid binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   CDD; cd08875; START_ArGLABRA2_like; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR042160; GLABRA2/ANL2/PDF2/ATML1-like.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR002913; START_lipid-bd_dom.
DR   PANTHER; PTHR45654; HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1; 1.
DR   PANTHER; PTHR45654:SF2; HOMEOBOX-LEUCINE ZIPPER PROTEIN TF1; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   Pfam; PF01852; START; 1.
DR   SMART; SM00389; HOX; 1.
DR   SMART; SM00234; START; 1.
DR   SUPFAM; SSF55961; Bet v1-like; 2.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
DR   PROSITE; PS50848; START; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW   ProRule:PRU00108};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          99..159
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DOMAIN          253..482
FT                   /note="START"
FT                   /evidence="ECO:0000259|PROSITE:PS50848"
FT   DNA_BIND        101..160
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT   REGION          1..68
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          82..102
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          168..227
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        17..55
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   745 AA;  80840 MW;  29DC62A8D992256C CRC64;
     MGIDEPSGGH PCFMESTSDI GDSSLIGPPS SIVVGLSSNR NETSEKNSSS YFGELHGNNG
     HGEIPGDGVS GINEVNLSIL VSNKNGSGKS PGDGQDGPKP KKRCLRRLTS RQAEILEGFF
     SVCAHPDENQ RIQLAAMTGL GLHQVKFWFQ NKRTHVKHLS GKEENCRLKV ENEMLREEND
     MFKQAQNNAL CPRCTNDPGF LQILKELEQV KAHNQMLQQE LQQMRIDNEA RLTMRPPIRV
     FHLEPSSGNA FGMQDEVQAL TEVAKSAAHE LFILSDSSSP LWLAVPGGSF QVLNRMAYAQ
     MFPGQMGVGT IGLTAEATRA SAVVMLDPKS IVEFLMDSGS FGAFFPGLMS GAATSTKVYN
     WPQNSEAGYD GAMQLLTVEM VFPSPLVPAR KCTFLRYCKR LELGAMAVVD VSLDDGAKCQ
     KMPSGILIQP IRHNSCKVTA IEHVRVDGSG THELFQACLS GLLFGARRWV MSMARQSARL
     RDVFHVTNCT LDVTSRGRKA IMKLADNLLA NYTGSIAGLP ADAWSVQCGE GTEEDVKIAY
     RRNDDGSNTA IVCTSATFLL PLPMRRVFDL LKSNLLRVKW DVLVNGGCVK EVVRVANGVG
     IEDAVSILHV KHGSGANKET MMILQNSCYD ASGSFMVYSS LDKHVMEMIT SPGGEEAMSN
     IALFPAGFSL VPLADPANAG CPIGEAGGTV MTAGFQILMK LARGTGLCPR SVSSAIKIMT
     EHIETIKDTL QNSHPVFYKT IQSPN
//
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