ID A0A3L6RDD9_PANMI Unreviewed; 590 AA.
AC A0A3L6RDD9;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=TOM1-like protein 2 isoform X1 {ECO:0000313|EMBL:RLN00496.1};
GN ORFNames=C2845_PM06G25360 {ECO:0000313|EMBL:RLN00496.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLN00496.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004170};
CC Peripheral membrane protein {ECO:0000256|ARBA:ARBA00004170}.
CC -!- SIMILARITY: Belongs to the TOM1 family.
CC {ECO:0000256|ARBA:ARBA00007708}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLN00496.1}.
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DR EMBL; PQIB02000009; RLN00496.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3L6RDD9; -.
DR STRING; 4540.A0A3L6RDD9; -.
DR Proteomes; UP000275267; Chromosome 6.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.
DR GO; GO:0043130; F:ubiquitin binding; IEA:InterPro.
DR GO; GO:0043328; P:protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IEA:InterPro.
DR CDD; cd14231; GAT_GGA-like_plant; 1.
DR CDD; cd03561; VHS; 1.
DR Gene3D; 1.20.58.160; -; 1.
DR Gene3D; 1.25.40.90; -; 1.
DR InterPro; IPR008942; ENTH_VHS.
DR InterPro; IPR004152; GAT_dom.
DR InterPro; IPR038425; GAT_sf.
DR InterPro; IPR044836; TOL_plant.
DR InterPro; IPR014645; TOM1.
DR InterPro; IPR002014; VHS_dom.
DR PANTHER; PTHR45898:SF2; TARGET OF MYB PROTEIN 1; 1.
DR PANTHER; PTHR45898; TOM1-LIKE PROTEIN; 1.
DR Pfam; PF03127; GAT; 1.
DR Pfam; PF00790; VHS; 1.
DR PIRSF; PIRSF036948; TOM1; 1.
DR SMART; SM00288; VHS; 1.
DR SUPFAM; SSF48464; ENTH/VHS domain; 1.
DR SUPFAM; SSF89009; GAT-like domain; 1.
DR PROSITE; PS50909; GAT; 1.
DR PROSITE; PS50179; VHS; 1.
PE 3: Inferred from homology;
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 9..138
FT /note="VHS"
FT /evidence="ECO:0000259|PROSITE:PS50179"
FT DOMAIN 183..271
FT /note="GAT"
FT /evidence="ECO:0000259|PROSITE:PS50909"
FT REGION 331..390
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 408..439
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 454..489
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 534..553
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 567..590
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 333..377
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 420..437
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 454..474
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 571..590
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 590 AA; 63685 MW; 9A52F0E3B878600E CRC64;
MAAVRVDKAT NELLLGPDWT LNIDICDAVN SDHGQAKEVI KALKKRLQHK NANVQFLALT
LLETLIKNCG DHVHVQVIER NILEEMMKIV KKKADMQVRD KILTLLDSWQ EAFGGPGGKH
PHYYWAYAEL KRSGVEFPKR SPDAAPIFTP PVTRPASLPS YLQAGYGIPV NSSSRLDVAM
SSNGASLSML DLERMLGAVE LLSEMLRAVD PNDHDAVNDE IITELVNQCR SDQKKVLSLV
SSLRDEELLG QALDLNDKLQ ILLEKHDAMV SGSPLPAEVT DVVSELSAGT TPNLGEEVAP
TAAVAPKIVS TNVLNYEEEE DEDDEFSLLA RRNSRFRPTN SENASSSLGT SSSTIHEGIP
SSAASVPSTT SSSIPSNALS PPDPPAPVRT SLEDQVMSDL LALTISSNSS PPYTPVTPEP
ALNQGGSTVS GHPQPYHVNQ GHASAHYVAP WAQPQSQTAT IQQQTSSQSH LPYNSLAYPP
PPWASHDSIE SNPFVAASSQ HQSSSNSPIN VPPNLRPLQQ SHSFAVPLRT TSLDSPINRN
LKQPLSAGAR RPSYVSSNKF FDDLFDKNSD GSLKVGSTVG SGTSSPYKAQ
//
