ID A0A3L6SA07_PANMI Unreviewed; 788 AA.
AC A0A3L6SA07;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Transcription initiation factor TFIID subunit 4b-like isoform X2 {ECO:0000313|EMBL:RLN17143.1};
GN ORFNames=C2845_PM02G22510 {ECO:0000313|EMBL:RLN17143.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLN17143.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLN17143.1}.
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DR EMBL; PQIB02000005; RLN17143.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3L6SA07; -.
DR STRING; 4540.A0A3L6SA07; -.
DR Proteomes; UP000275267; Chromosome 2.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd08045; TAF4; 1.
DR InterPro; IPR022003; RST.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR PANTHER; PTHR15138:SF24; OS03G0441000 PROTEIN; 1.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF12174; RST; 1.
DR Pfam; PF05236; TAF4; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000313|EMBL:RLN17143.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein biosynthesis {ECO:0000313|EMBL:RLN17143.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 130..164
FT /note="RST"
FT /evidence="ECO:0000259|Pfam:PF12174"
FT DOMAIN 498..743
FT /note="Transcription initiation factor TFIID component TAF4
FT C-terminal"
FT /evidence="ECO:0000259|Pfam:PF05236"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 33..125
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 169..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 223..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 339..368
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 400..496
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 626..677
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 708..748
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..51
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 69..120
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 169..200
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 223..253
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 400..463
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 477..496
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 714..728
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 733..748
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 788 AA; 86366 MW; E13272D485C73D86 CRC64;
MDPIMKLLED DEDESLHSGA DVEAFTAALN REVEASASSS TTISAPAAAS SSQPMDHGAA
LLPQENKSLL NHGHGQWQDP VKNETANQDS QQQEQTYLHR NDQPSRPEMV SQSSDNKHLP
SNTPKECELL KKLHKNEVSK EHFLKVVRNI VGDKVLKLAL SEYQMQHTAQ AQRNSQTNPS
NYSLSSQVSG QQTVPSGSMT DEQEAYPGAH TIPTKQAIAS LRGPQFRPSS SGQMQSIRGF
SPSQSNAHKA NETGNISDGK GVHVLQTRPP NNLLPVQTMQ HHVQRPQTSS PMFGTNSIHA
RPFPRPVGSP AASFRPQMTD SNQRAQLVQG AVTTVAGSVP TQSIVPGNAA TNQPKWQQSA
NKEQKTNSFA PTALNKETIS QNSESSQNSF VAMHAKQVNQ SLGSSKGGSG MENQPKLSAS
KSSTPTSISQ TQSHGTQADP KLQVQSSVQA PPAAASKTPQ RKASGQKKPL EALGSSPPPS
SKKQKTSGGF HEQSIDQLND VTAVSGVNLR EEEEQLFSAP KEESRVSEAA RRVVQLEEEK
LILQKGPLTK KLAEIMRKCN LKVIGTDVER CLSMVRGYPC VEERLRGFIS NIIRFSKQRV
DVEKSRHRFY PLSSDVRSHI MRVNREAKEQ WDKKQAEDAE RIRKQNDGDG STNIDLEKDK
NETRASSKHA KYKEDDDKMR TTAANVAARV AAGGDDMLSK WQLLAERNKQ RSEGGDGSSG
SLPGNMLQHK PSPKSGKDSR EEQENEKRGY STMLGSVLRV VGFQVCTPWF MRRLLPAIPL
ASQDATRF
//
