ID A0A3L6SCS3_PANMI Unreviewed; 447 AA.
AC A0A3L6SCS3;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=Autophagy-related protein 16 domain-containing protein {ECO:0000259|Pfam:PF08614};
GN ORFNames=C2845_PM02G05110 {ECO:0000313|EMBL:RLN18761.1};
OS Panicum miliaceum (Proso millet) (Broomcorn millet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Panicodae; Paniceae; Panicinae; Panicum.
OX NCBI_TaxID=4540 {ECO:0000313|EMBL:RLN18761.1, ECO:0000313|Proteomes:UP000275267};
RN [1] {ECO:0000313|Proteomes:UP000275267}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=30683860; DOI=10.1038/s41467-019-08409-5;
RA Zou C., Miki D., Li D., Tang Q., Xiao L., Rajput S., Deng P., Jia W.,
RA Huang R., Zhang M., Sun Y., Hu J., Fu X., Schnable P.S., Li F., Zhang H.,
RA Feng B., Zhu X., Liu R., Schnable J.C., Zhu J.-K., Zhang H.;
RT "The genome of broomcorn millet.";
RL Nat. Commun. 10:436-436(2019).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLN18761.1}.
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DR EMBL; PQIB02000005; RLN18761.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3L6SCS3; -.
DR STRING; 4540.A0A3L6SCS3; -.
DR Proteomes; UP000275267; Chromosome 2.
DR GO; GO:0000045; P:autophagosome assembly; IEA:InterPro.
DR CDD; cd22887; Atg16_CCD; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045160; ATG16.
DR InterPro; IPR013923; Autophagy-rel_prot_16_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19878; AUTOPHAGY PROTEIN 16-LIKE; 1.
DR PANTHER; PTHR19878:SF8; AUTOPHAGY-RELATED 16, ISOFORM F; 1.
DR Pfam; PF08614; ATG16; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000275267};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 31..168
FT /note="Autophagy-related protein 16"
FT /evidence="ECO:0000259|Pfam:PF08614"
FT REPEAT 221..262
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 305..347
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 361..387
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT COILED 86..184
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 447 AA; 49335 MW; F0EA2EF30ABBD2C7 CRC64;
MAEAEAGRAA IRRALRSLKR RHLAEEGAHS PAIEALTRPF AAHALEWKEK AEKHELELQQ
CYKAQSRLSE QLVTEIEEGK ASKALLKEKE AMVTSLQAEL EKTSEENVQL KQSLDEKTKA
LDLLIQEHQA VKAELEQALT KLKAAEDENQ SLIDRWMLEK MKDAERLNEA NAMYEEMVLK
LKTAGVGGIQ HNAQQEADGI IRRSEAGYME TPIPSTCTIT IRAHDGGCGS LMFEHNSDKL
ISGGQDQTVK IWGAYTGALT STLHGVLGSV NDLAVTNDNK FVVAACSSNK LFVWEVNGGR
PRHTLTGHTK NVSSVDASWV KSFVVASSSN DRTIKIWDLQ TGFCKSTIMS ASNPNSLAFI
DGDIICSGHR DGNLRLWDIR SGKCTTQIAA HLDVTSVCVS RSKNFILTSG RDNVHNLFDV
RTLEVCGTFR ATGILDLLLW HDTHSET
//
