ID   A0A3L8SHX6_CHLGU        Unreviewed;       775 AA.
AC   A0A3L8SHX6;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   24-JAN-2024, entry version 21.
DE   RecName: Full=NF-kappa-B-repressing factor {ECO:0008006|Google:ProtNLM};
GN   ORFNames=DV515_00007111 {ECO:0000313|EMBL:RLW02411.1};
OS   Chloebia gouldiae (Gouldian finch) (Erythrura gouldiae).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Passeridae;
OC   Chloebia.
OX   NCBI_TaxID=44316 {ECO:0000313|EMBL:RLW02411.1, ECO:0000313|Proteomes:UP000276834};
RN   [1] {ECO:0000313|EMBL:RLW02411.1, ECO:0000313|Proteomes:UP000276834}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Red01 {ECO:0000313|EMBL:RLW02411.1};
RC   TISSUE=Muscle {ECO:0000313|EMBL:RLW02411.1};
RX   PubMed=30282656;
RA   Toomey M.B., Marques C.I., Andrade P., Araujo P.M., Sabatino S.,
RA   Gazda M.A., Afonso S., Lopes R.J., Corbo J.C., Carneiro M.;
RT   "A non-coding region near Follistatin controls head colour polymorphism in
RT   the Gouldian finch.";
RL   Proc. R. Soc. B 285:0-0(2018).
CC   -!- SIMILARITY: Belongs to the CARF family.
CC       {ECO:0000256|ARBA:ARBA00010053}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RLW02411.1}.
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DR   EMBL; QUSF01000018; RLW02411.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3L8SHX6; -.
DR   STRING; 44316.ENSEGOP00005020423; -.
DR   Ensembl; ENSEGOT00005023363; ENSEGOP00005020423; ENSEGOG00005016330.
DR   OMA; SVLWTNH; -.
DR   Proteomes; UP000276834; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:UniProtKB-UniRule.
DR   CDD; cd02640; R3H_NRF; 1.
DR   Gene3D; 3.30.160.20; -; 2.
DR   Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR   InterPro; IPR014720; dsRBD_dom.
DR   InterPro; IPR000467; G_patch_dom.
DR   InterPro; IPR001374; R3H_dom.
DR   InterPro; IPR036867; R3H_dom_sf.
DR   InterPro; IPR034071; R3H_NRF.
DR   InterPro; IPR021859; XTBD.
DR   PANTHER; PTHR16148:SF15; NF-KAPPA-B-REPRESSING FACTOR; 1.
DR   PANTHER; PTHR16148; NF-KAPPA-B-REPRESSING FACTOR-RELATED; 1.
DR   Pfam; PF00035; dsrm; 2.
DR   Pfam; PF01585; G-patch; 1.
DR   Pfam; PF01424; R3H; 1.
DR   Pfam; PF11952; XTBD; 1.
DR   SMART; SM00358; DSRM; 3.
DR   SMART; SM00443; G_patch; 1.
DR   SMART; SM00393; R3H; 1.
DR   SUPFAM; SSF54768; dsRNA-binding domain-like; 2.
DR   SUPFAM; SSF82708; R3H domain; 1.
DR   PROSITE; PS50174; G_PATCH; 1.
DR   PROSITE; PS51061; R3H; 1.
DR   PROSITE; PS51827; XTBD; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000276834}.
FT   DOMAIN          22..110
FT                   /note="XRN2-binding (XTBD)"
FT                   /evidence="ECO:0000259|PROSITE:PS51827"
FT   DOMAIN          636..681
FT                   /note="G-patch"
FT                   /evidence="ECO:0000259|PROSITE:PS50174"
FT   DOMAIN          685..749
FT                   /note="R3H"
FT                   /evidence="ECO:0000259|PROSITE:PS51061"
FT   REGION          106..126
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   775 AA;  86963 MW;  A80A72D2B1FD0615 CRC64;
     MPQPAEPPPA EPRPEAAAEP ALEQWRQYNE TDRQWALRRR FILRHLPAYP GAAIERLLAL
     SVLWTNHVFM GCRYGVQVME KVLQMAEGID IGETRSYELV PSRKLKRYRS PSDSPEPEEV
     PEPPKKVVPR FRVRPRFEPI HFVTSAEKDG KKDNSLDNQR QEVNQEANTN SMAQPAENCT
     NSFVNAREAN PQLSSSAGLG FAGPAAATKK AVNSVDSTTS NAVQVSVSPS TAPSASESFP
     PSAIMLKQSF MEKLSAAVWK NLTNPDANTG TDKINFTYLL TRSIQACKTN PEYIYVPLKE
     IAPADLPKSK KLLTDGFACE VRCQNVYLAT GYAGSKNGSR DRAAEQAVKL LKKSVEVRVV
     QRKFKHTYHE DLVVCEAGVC RPDFPPALKP HEEFVVANRD CVPMQPGTES MKGSANANKD
     WTSFVLTENA SDAIGILNNS ASYNKMSVEY KYELMPNRSW RCQVYLQDHC LAEGFGTKKT
     SKHAAAEEAL KILQKMQSNI ASIKVTQVQK VGCSSRGSGR KKDLKDLVIY ENSSNPVCTL
     NDTAQFNKMT VEYVFERMTG MRWKCKVMLE DEFIAEAVGV KKSVKHEAAE EAVKILKKTQ
     PTVVNNLKKG TVEDVISRNE IRGRSAEEAF KQKIKEDNIG NQILRKMGWT GGGLGKDGEG
     IREPISVKEQ FKREGLGLDV ERVNRIAKRD IEEIIRNYAR SDSHIDLTFS RELTMDERKQ
     IHQIAQKYGL KSKSHGQGHN RYLVVSRKRR KEDLLDQLKQ EGQVGHYELI MPQAN
//