ID A0A3L8ST20_CHLGU Unreviewed; 796 AA.
AC A0A3L8ST20;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=SLED domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=DV515_00003648 {ECO:0000313|EMBL:RLW07692.1};
OS Chloebia gouldiae (Gouldian finch) (Erythrura gouldiae).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Passeridae;
OC Chloebia.
OX NCBI_TaxID=44316 {ECO:0000313|EMBL:RLW07692.1, ECO:0000313|Proteomes:UP000276834};
RN [1] {ECO:0000313|EMBL:RLW07692.1, ECO:0000313|Proteomes:UP000276834}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Red01 {ECO:0000313|EMBL:RLW07692.1};
RC TISSUE=Muscle {ECO:0000313|EMBL:RLW07692.1};
RX PubMed=30282656;
RA Toomey M.B., Marques C.I., Andrade P., Araujo P.M., Sabatino S.,
RA Gazda M.A., Afonso S., Lopes R.J., Corbo J.C., Carneiro M.;
RT "A non-coding region near Follistatin controls head colour polymorphism in
RT the Gouldian finch.";
RL Proc. R. Soc. B 285:0-0(2018).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RLW07692.1}.
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DR EMBL; QUSF01000007; RLW07692.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3L8ST20; -.
DR STRING; 44316.ENSEGOP00005009473; -.
DR Proteomes; UP000276834; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd20106; MBT_SCML2_rpt1; 1.
DR CDD; cd20109; MBT_SCML2_rpt2; 1.
DR Gene3D; 2.30.30.140; -; 2.
DR Gene3D; 3.90.1150.190; SLED domain; 1.
DR InterPro; IPR004092; Mbt.
DR InterPro; IPR033763; SCML2_RBR.
DR InterPro; IPR021987; SLED.
DR InterPro; IPR038348; SLED_sf.
DR PANTHER; PTHR12247; POLYCOMB GROUP PROTEIN; 1.
DR PANTHER; PTHR12247:SF84; SEX COMB ON MIDLEG-LIKE PROTEIN 2; 1.
DR Pfam; PF02820; MBT; 2.
DR Pfam; PF17208; RBR; 1.
DR Pfam; PF12140; SLED; 1.
DR SMART; SM00561; MBT; 2.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR PROSITE; PS51079; MBT; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000276834};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 1..87
FT /note="MBT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT REPEAT 95..196
FT /note="MBT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT DOMAIN 247..298
FT /note="Polycomb group protein RNA binding region"
FT /evidence="ECO:0000259|Pfam:PF17208"
FT DOMAIN 386..495
FT /note="SLED"
FT /evidence="ECO:0000259|Pfam:PF12140"
FT REGION 201..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 517..589
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..244
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 547..573
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 574..589
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 796 AA; 86580 MW; F311BEB0D850D50C CRC64;
MVMLSSTACQ SRIPPKNDFK VGMKLEAHDP RNVTSVCIAT VIGITGARLR LRLDGSDNKN
DFWRLVDSSD IQPIGTCEKK GGMLQPPLGF QMNASSWPMF LLRTLSGAEI APAAFFKKEP
PKPVPNCFKV GMKLEAIDRK NPYLICPATI GDVKGDEVFV TFDGWRGAFD YWCRCDSRDI
FPVGWCSLTG DALQPPGNND PVTQCNLWSP SEGPVSITKS SAKIQSSPSK VTRRSMQSPQ
KSAPVPAQRG RKPGRGKPPG QSAVPKKGRS PKNIPLTKTT SHTENLKTRK KSLKPGKKAD
RAAVPSQLAG AGHTKPLCPA LQGLWPVSQN NTPLGSQLSW GKKILPEQLT PTSLSPQSSP
EGENGTAQML KDGISLSGAT AAVISTVCVY VNKHGNSGPH LDKKKVQQLP DHFGPGPVNV
VLQQAVQACV DCAYQAKTVF GFLKSGHHGG EVITASFDGE KHAINLPSVN SASFVLRFLE
KLCHSLQCDN LFSSQPFSPY MGCAHSPMEY DRNKPAKEEI PENRSAKRYP QDSPPYTAPL
SPKLPRNDAH PSEETLPIEE NSASKDHRFS EDSMDSALNS VNPTCRNSTE YRTSGNAAYY
RNSHQPATAT PNSAPVLRRL SLSSAGSSGY YEVSRNRMQR RIEAASSTTG PDLNSLKREP
SRILNKDPST WSIEEVVHFV KEADPRALAP HAELFRRHFK QWKRQEAGWL SPVCSADPSL
REWLQPVSQA LGMLVATGSA REPAHPGPLY APVFDGFPEG LGAVPGLGRA LHIVALQHRV
LGQVPFEGKV FGGDPR
//
