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Database: UniProt
Entry: A0A3M0IYS7_HIRRU
LinkDB: A0A3M0IYS7_HIRRU
Original site: A0A3M0IYS7_HIRRU 
ID   A0A3M0IYS7_HIRRU        Unreviewed;      1038 AA.
AC   A0A3M0IYS7;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   RecName: Full=SAM domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=DUI87_31703 {ECO:0000313|EMBL:RMB91893.1};
OS   Hirundo rustica rustica.
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae;
OC   Hirundo.
OX   NCBI_TaxID=333673 {ECO:0000313|EMBL:RMB91893.1, ECO:0000313|Proteomes:UP000269221};
RN   [1] {ECO:0000313|EMBL:RMB91893.1, ECO:0000313|Proteomes:UP000269221}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Chelidonia {ECO:0000313|EMBL:RMB91893.1};
RC   TISSUE=Blood {ECO:0000313|EMBL:RMB91893.1};
RA   Formenti G., Chiara M., Poveda L., Francoijs K.-J., Bonisoli-Alquati A.,
RA   Canova L., Gianfranceschi L., Horner D.S., Saino N.;
RT   "A high quality draft genome assembly of the barn swallow (H. rustica
RT   rustica).";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RMB91893.1}.
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DR   EMBL; QRBI01000232; RMB91893.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3M0IYS7; -.
DR   STRING; 333673.A0A3M0IYS7; -.
DR   Proteomes; UP000269221; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd20135; MBT_L3MBTL3_rpt2; 1.
DR   CDD; cd20139; MBT_L3MBTL4_rpt3; 1.
DR   CDD; cd12594; RRM1_SRSF4; 1.
DR   CDD; cd12764; RRM2_SRSF4; 1.
DR   CDD; cd09582; SAM_Scm-like-3MBT3_4; 1.
DR   Gene3D; 2.30.30.140; -; 3.
DR   Gene3D; 3.30.70.330; -; 2.
DR   Gene3D; 4.10.320.30; -; 1.
DR   Gene3D; 1.10.150.50; Transcription Factor, Ets-1; 1.
DR   InterPro; IPR004092; Mbt.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR001660; SAM.
DR   InterPro; IPR013761; SAM/pointed_sf.
DR   InterPro; IPR002515; Znf_C2H2C.
DR   PANTHER; PTHR12247; POLYCOMB GROUP PROTEIN; 1.
DR   PANTHER; PTHR12247:SF130; SAM DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF02820; MBT; 3.
DR   Pfam; PF00076; RRM_1; 2.
DR   Pfam; PF00536; SAM_1; 1.
DR   Pfam; PF01530; zf-C2HC; 1.
DR   SMART; SM00561; MBT; 3.
DR   SMART; SM00360; RRM; 2.
DR   SMART; SM00454; SAM; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   SUPFAM; SSF47769; SAM/Pointed domain; 1.
DR   SUPFAM; SSF63748; Tudor/PWWP/MBT; 3.
DR   PROSITE; PS51079; MBT; 3.
DR   PROSITE; PS50102; RRM; 2.
DR   PROSITE; PS50105; SAM_DOMAIN; 1.
DR   PROSITE; PS51802; ZF_CCHHC; 1.
PE   4: Predicted;
KW   Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000269221};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU01143}.
FT   DOMAIN          2..72
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          104..177
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REPEAT          553..594
FT                   /note="MBT"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT   REPEAT          602..701
FT                   /note="MBT"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT   REPEAT          710..805
FT                   /note="MBT"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00459"
FT   DOMAIN          971..1035
FT                   /note="SAM"
FT                   /evidence="ECO:0000259|PROSITE:PS50105"
FT   REGION          72..97
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          169..472
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          486..550
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          860..899
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        182..240
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        241..344
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        366..382
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        383..421
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        432..446
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        486..501
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1038 AA;  118107 MW;  DE9585401535913A CRC64;
     MPRVYIGRLS YQARERDVER FFKGYGKILE VDLKNGYGFV EFDDLRDADD AVYELNGKDL
     CGERVIVEHA RGPRRDSSYG SGRSGYGYRR SGRDKYGPPT RTEYRLIVEN LSSRCSWQDL
     KDYMRQAGEV TYADAHKGRK NEGVIEFKSY SDMKRALEKL DGTEVNGRKI RLVEDRPGSR
     RRRSYSRSRS HSRSRSRSRH SRKSRSRSPS SSRSKSRSRS RSVSRSRSKS RSRSKSRSRG
     QKERSRTPSK EDKSRSRSRS AEKSRNKSKD KSESILHNSD EKTKSRSRSK EKSRSTSGSK
     ERGEARESVR SRSKEKSRSK DREKSISKAR SRSKSRDESR SRSHSKDKRK SRKRSRDDSR
     SRSRSRSKSE KSKRRSKRDS KGSSKRRKDS HERSRSGSKG KEQLKSESDK KEAKGEGEGA
     VSRSRSRSIS KSKPNVKSDS RSRSKSVSKP RSRSKSRPWN LQQEAAAPEV VEGSELDGML
     QMIAETGNNG NLTTSSGCQV TEAGRPVRRL RRKRRLPLDS EDEEENAYED EEKNKSNNMK
     SRRNTKPIKQ GPGYRMRLHF DGYPECYDFW ANADSSDIHP VGWCEKTNHK LLPPKGFKEG
     EFNWTSYLKN CKAQAAPKSL FKTLSSPVTP SGFRLGMKLE AVDKKNPSLV CVATITDMVE
     NRLLIHFDNW DESYDYWCET SSPYIRPVGY CQETGIPLTT PPGHKDSKAF SWEKYLEETN
     SQAAPARAFK LRPPHGFQVN TKLEAVDRRN PILIRVATIV DKDNHRVKIH FDGWDHHYDF
     WVDADSPDIH PVGWCDKTGH ALQVPLGAED PEGAVGQACP TPGCQGIGHI RGPRYGTHYT
     LVGCPYSDVN LSRENLLQDR LSGERPSAGN SMQKARRVET PGPLLRAGES SQGDSSQSRL
     GCSHAYIKFQ LVKQESNGKG PDLDLQQALH QSIFMPSLAS NPTHRLHLFW EQHCRLLPEV
     SGLTAKQVAK WTVEEVVSFI QRLPGCKEQA SVFREEQIDG EAFLLLKQND IVKILSIKLG
     PALKIYNAIL MFKSAEDN
//
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