ID A0A3M0K4S4_HIRRU Unreviewed; 817 AA.
AC A0A3M0K4S4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 08-NOV-2023, entry version 14.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=DUI87_14450 {ECO:0000313|EMBL:RMC08209.1};
OS Hirundo rustica rustica.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae;
OC Hirundo.
OX NCBI_TaxID=333673 {ECO:0000313|EMBL:RMC08209.1, ECO:0000313|Proteomes:UP000269221};
RN [1] {ECO:0000313|EMBL:RMC08209.1, ECO:0000313|Proteomes:UP000269221}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Chelidonia {ECO:0000313|EMBL:RMC08209.1};
RC TISSUE=Blood {ECO:0000313|EMBL:RMC08209.1};
RA Formenti G., Chiara M., Poveda L., Francoijs K.-J., Bonisoli-Alquati A.,
RA Canova L., Gianfranceschi L., Horner D.S., Saino N.;
RT "A high quality draft genome assembly of the barn swallow (H. rustica
RT rustica).";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RMC08209.1}.
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DR EMBL; QRBI01000117; RMC08209.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3M0K4S4; -.
DR STRING; 333673.A0A3M0K4S4; -.
DR Proteomes; UP000269221; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:InterPro.
DR CDD; cd16504; RING-HC_COP1; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR042755; COP1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR44080; E3 UBIQUITIN-PROTEIN LIGASE COP1; 1.
DR PANTHER; PTHR44080:SF1; E3 UBIQUITIN-PROTEIN LIGASE COP1; 1.
DR Pfam; PF00400; WD40; 5.
DR Pfam; PF13923; zf-C3HC4_2; 1.
DR SMART; SM00184; RING; 1.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000269221};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 60..98
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REPEAT 534..576
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 620..660
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 225..245
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 155..219
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 817 AA; 91546 MW; BCEEEC5A73BB3B67 CRC64;
MVAAAVSGSG PGLPRLAAGA ARPGGSSAAP GGGGRKRPLL TPLCNGLINS YEDKSNDFVC
PICFDMIEEA YMTKCGHSFC YKCIHQSLED NNRCPKCNYV VDNIDHLYPN FLVNELILKQ
KQRSEEKRLK LDHSNGHRWQ IIQDLLGTDQ DNLDLANVNL MLELLVQKKK QLEAESHAAQ
LQILMEFLKV ARRNKREQLE QIQKELSVLE EDIKRVEEMS GLYSPVSEDS TVPQFEAPSP
SHSSIIDSTE YSQPPGFSGS SQTKKQPWYN STLASRRKRL TAHFEDLEQC YFSTRMTRVS
DDSRTTSQLD EFQECLSKFT RYNSVRPLAT LSYASDLYNG SSIVSSLDLK SKPSGDHSDA
AARSFFFHQL NSSNLNNLKL GALVPQNEHW KEIARLGIVR SDRIPLGGHG VEAQNEKDLK
EIFIDVYYKL ALRVKKEGAS ICTSNRKWKS CIEFDRDCDY FAIAGVTKKI KVYEYGTVIQ
DAVDIHYPEN EMTCNSKISC ISWSSYHKNL LASSDYEGTV ILWDGFTGQR SKVYQEHEKR
CWSVDFNLMD PKLLASGSDD AKVKLWSTNL DNSVASIEAK ANVCCVKFSP SSRYHLAFGC
ADHCVHYYDL RNTKQPIMVF KGHRKAVSYA KFVSGEEIVS ASTDSQLKLW NVGKPHCLRS
FKGHINEKNF VGLASNGDYI ACGSENNSLY LYYKGLSKTL LTFKFDTVKS VLDKDRKEDD
TNEFVSAVCW RALPDGAEQP HLSSQETCST PVISLVASSG PSVYNVYYLW CPGAEPPESS
RSQQDPGKSS SANIDGKSCQ ATTIQQLQFM SCINLLL
//
