ID   A0A3M0L7N3_HIRRU        Unreviewed;       464 AA.
AC   A0A3M0L7N3;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   27-MAR-2024, entry version 19.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:RMC21519.1};
GN   ORFNames=DUI87_02385 {ECO:0000313|EMBL:RMC21519.1};
OS   Hirundo rustica rustica.
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea; Hirundinidae;
OC   Hirundo.
OX   NCBI_TaxID=333673 {ECO:0000313|EMBL:RMC21519.1, ECO:0000313|Proteomes:UP000269221};
RN   [1] {ECO:0000313|EMBL:RMC21519.1, ECO:0000313|Proteomes:UP000269221}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Chelidonia {ECO:0000313|EMBL:RMC21519.1};
RC   TISSUE=Blood {ECO:0000313|EMBL:RMC21519.1};
RA   Formenti G., Chiara M., Poveda L., Francoijs K.-J., Bonisoli-Alquati A.,
RA   Canova L., Gianfranceschi L., Horner D.S., Saino N.;
RT   "A high quality draft genome assembly of the barn swallow (H. rustica
RT   rustica).";
RL   Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the RENT3 family.
CC       {ECO:0000256|ARBA:ARBA00005991}.
CC   -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL39 family.
CC       {ECO:0000256|ARBA:ARBA00009339}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RMC21519.1}.
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DR   EMBL; QRBI01000093; RMC21519.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3M0L7N3; -.
DR   STRING; 333673.A0A3M0L7N3; -.
DR   Proteomes; UP000269221; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IEA:UniProt.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   CDD; cd12728; RRM_like_Smg4_UPF3B; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 1.10.1620.10; Ribosomal protein L39e; 1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000077; Ribosomal_eL39.
DR   InterPro; IPR023626; Ribosomal_eL39_dom_sf.
DR   InterPro; IPR049337; TOR1A_C.
DR   InterPro; IPR039722; Upf3.
DR   InterPro; IPR005120; UPF3_dom.
DR   InterPro; IPR034979; UPF3B_RRM-like.
DR   PANTHER; PTHR13112:SF1; REGULATOR OF NONSENSE TRANSCRIPTS 3B; 1.
DR   PANTHER; PTHR13112; UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; 1.
DR   Pfam; PF00832; Ribosomal_L39; 1.
DR   Pfam; PF03467; Smg4_UPF3; 1.
DR   Pfam; PF21376; TOR1A_C; 1.
DR   SUPFAM; SSF48662; Ribosomal protein L39e; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000269221};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980}.
FT   DOMAIN          59..216
FT                   /note="UPF3"
FT                   /evidence="ECO:0000259|Pfam:PF03467"
FT   DOMAIN          403..453
FT                   /note="Torsin-1A C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF21376"
FT   REGION          1..60
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          222..360
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        42..60
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   464 AA;  54203 MW;  935C66D64E9912AE CRC64;
     MKEDKENARP KERRGASAGT GALLAAGPGT GPAAGTDGRA GAAELDRPER PKDKKETLSK
     VVIRRLPPSL TKEQLEEHLQ PLPEHDYFEF FANDSSLYPH MFSRAYINFK NQEDIVLFRD
     RFDGYVFVDH KGQEYAAIVE FAPFQKAAKK KSKKKDAKTG TIEDDPEYKK FLESYSADDE
     KLTSTPETLL EEIEARNKEL IAKKTTPLLN FLKNKQLLKK PEKDLERKEK SKKLEKEPLR
     EEKNASSASA KRSDGETKED KAKKSEDECV KDYRDRDRDF DRDREYERAQ REKLKCQEEE
     RRRQKERYEK EKVFRRKEEE VKKERDLFRE KGKKSDLTDF TSSTDKSEKV TKDDKREDTI
     KRDRIRNKSS HKTFKIKRFL AKKQKQNRPI PQWIRMKTGN KIRHVKICVR AEMTAHGHAM
     DEKTVQAAAN EMTYFPKEQK VYSDKGYKIV QSKSCISTLN LQST
//