ID A0A3M8AC11_9MICO Unreviewed; 217 AA.
AC A0A3M8AC11;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:RNB48809.1};
GN ORFNames=EDM22_10725 {ECO:0000313|EMBL:RNB48809.1};
OS Agromyces tardus.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Agromyces.
OX NCBI_TaxID=2583849 {ECO:0000313|EMBL:RNB48809.1, ECO:0000313|Proteomes:UP000275048};
RN [1] {ECO:0000313|EMBL:RNB48809.1, ECO:0000313|Proteomes:UP000275048}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SJ-23 {ECO:0000313|EMBL:RNB48809.1,
RC ECO:0000313|Proteomes:UP000275048};
RA Sun T.;
RT "Isolation, diversity and antibacterial activity of antinobacteria from the
RT wheat rhizosphere soil.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RNB48809.1}.
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DR EMBL; RHHB01000018; RNB48809.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3M8AC11; -.
DR OrthoDB; 5501064at2; -.
DR Proteomes; UP000275048; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF61; RNA POLYMERASE SIGMA-70 FACTOR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000275048};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 53..115
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 151..200
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
SQ SEQUENCE 217 AA; 23801 MW; 592D85DBE9DBA3DF CRC64;
MADYDGALSR SKLRGASSSR AASGGAARAE AFPGVLLAAQ SGAQWACTNL WVDYAPAVMA
FLRARGSHEP EDLTSEVFLA VFDQLDRFRG GEPEFRTFVF TIAYRRLVDE LRRRSARGIH
EEWSEELDTR RSPSAEHEAT TQLADAATRA LLDGLPPDQR NVMVLRIIAD LTVEQVAAVL
GKRPGAVKAL QRRALESLRR RLAAGRTPPG PSDDSRE
//
