ID A0A3M9MQP4_9BACT Unreviewed; 1121 AA.
AC A0A3M9MQP4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=DNA 3'-5' helicase {ECO:0000256|ARBA:ARBA00034808};
DE EC=5.6.2.4 {ECO:0000256|ARBA:ARBA00034808};
GN ORFNames=EFA69_15435 {ECO:0000313|EMBL:RNI27517.1};
OS Rufibacter immobilis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Rufibacter.
OX NCBI_TaxID=1348778 {ECO:0000313|EMBL:RNI27517.1, ECO:0000313|Proteomes:UP000271010};
RN [1] {ECO:0000313|EMBL:RNI27517.1, ECO:0000313|Proteomes:UP000271010}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MCC P1 {ECO:0000313|EMBL:RNI27517.1,
RC ECO:0000313|Proteomes:UP000271010};
RA Yang Y.;
RT "Rufibacter latericius sp. nov., isolated from water in Baiyang Lake.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=5.6.2.4;
CC Evidence={ECO:0000256|ARBA:ARBA00034618};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RNI27517.1}.
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DR EMBL; RJJE01000017; RNI27517.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3M9MQP4; -.
DR OrthoDB; 9810135at2; -.
DR Proteomes; UP000271010; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR Gene3D; 1.10.3170.10; Recbcd, chain B, domain 2; 1.
DR InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014016; UvrD-like_ATP-bd.
DR PANTHER; PTHR11070:SF67; DNA HELICASE; 1.
DR PANTHER; PTHR11070; UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER; 1.
DR Pfam; PF00580; UvrD-helicase; 1.
DR Pfam; PF13361; UvrD_C; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51198; UVRD_HELICASE_ATP_BIND; 1.
DR PROSITE; PS51217; UVRD_HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU00560}; Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000256|PROSITE-ProRule:PRU00560};
KW Hydrolase {ECO:0000256|PROSITE-ProRule:PRU00560};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU00560}.
FT DOMAIN 1..501
FT /note="UvrD-like helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51198"
FT DOMAIN 543..800
FT /note="UvrD-like helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51217"
FT COILED 232..259
FT /evidence="ECO:0000256|SAM:Coils"
FT BINDING 10..17
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00560"
SQ SEQUENCE 1121 AA; 129125 MW; BB24CC38C493EBED CRC64;
MPASFKIYSS SAGSGKTYHL TKEYLKLALQ SEEPSYYKNI LAITFTNDAA QEMKTRILGA
LRGFNDTALP EKEKRNSDQL LFYILQEIRT EYGQSDLTEE GLRARASKVF DHLLFHYSEF
AVSTIDSFVN KVVSAFTTEL KLPHNFEVDM DAQTLLSTAV SLLLNKVNTQ AENRLLAETL
QQYALDKAEE GKSWNVLPDE LADFARNLLN EQTYEHLLDI GKLTLQDFKK IRSELYSQKV
NVEKQIQTLA QEASDLIDRH GIMPEEMSYG KNGIYSYFRK WNSGFDITIA NSNAAKTVND
DKWASAKAST GAKVALDQIK PRLAEIYRGI EDLKERETQN HILISAMLPH LYKLSVLSEL
DRCIQEIKLD KNLVHISEFN KRITEIVLQE PIPFIYERLG ERYQHILIDE FQDTSVLQWN
NLLPLVENAL AGDNFNMVVG DAKQAIYGWR GGEMEQILHL HRNQTHHLYQ NSRFEENVAP
RYDTLRWTLS PDNLNTNYRS APEIIQFNNE LFGFISQSNP QFPLLQAIYD DKFQQESPAG
KESGKAHLQV LFTQDEVPPF KVDLDACRQT EEIYEGYAEE DLLSYQESTL QLVLQMVQQA
QADGYAPRDI AILSRTNRNS KLVANFLKQK KYDIISQDSL SLQFAEVINL IIAFFRILNQ
PTNSLARSQA LYLVYKVVHQ ELPDSATTGK IAALAVEPSI DPFFQFLQQQ GFDLAYRDAG
NLSIYELTEK LIRVFDLLDK NNECEYLFRF LDLVLEYTLK YSNNLNNFLQ YWDLHKENLS
INTPKDRDAI TITSIHKSKG LDYPVVIVPF CDWSLEPQTS SLLWGTLPES VAAGGKLRTA
VVNLNKKLEQ TALADQYAQK LEKTFIESLN MLYVALTRPV DRLYLIGKAQ DFRKGGAQKN
VSFWLHKYLE SKALWQEGQF CYQLAKGAPQ AVSHKAVSED VYVLDKFTSA DWAQNLKLKQ
HANNVFDFET QQEHRRWNRK LHYALARITY ADDAPKALRQ LVHQGIISQR ELPTLTQMVD
HVLTHPQMQR YFSRAVTVEN EREVLDVRTN RYKPDRIVFG ETGEVTLIDY KLPPAKEEYV
ENLNSYAALF RELMMSRITC VVYYFEEERV EEWEFVGEVA G
//