ID A0A3M9NSI5_9BACT Unreviewed; 1278 AA.
AC A0A3M9NSI5;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=TIR domain-containing protein {ECO:0000313|EMBL:RNI40173.1};
GN ORFNames=EFY79_02435 {ECO:0000313|EMBL:RNI40173.1};
OS Hanamia caeni.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Hanamia.
OX NCBI_TaxID=2294116 {ECO:0000313|EMBL:RNI40173.1, ECO:0000313|Proteomes:UP000267223};
RN [1] {ECO:0000313|EMBL:RNI40173.1, ECO:0000313|Proteomes:UP000267223}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BO-59 {ECO:0000313|EMBL:RNI40173.1,
RC ECO:0000313|Proteomes:UP000267223};
RA Im W.T.;
RT "Draft genome sequence of Ferruginibacter sp. BO-59.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RNI40173.1}.
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DR EMBL; RJJR01000001; RNI40173.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3M9NSI5; -.
DR OrthoDB; 1492850at2; -.
DR Proteomes; UP000267223; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd00200; WD40; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 6.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR049052; nSTAND1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22847:SF637; WD REPEAT DOMAIN 5; 1.
DR PANTHER; PTHR22847; WD40 REPEAT PROTEIN; 1.
DR Pfam; PF20703; nSTAND1; 1.
DR Pfam; PF13676; TIR_2; 1.
DR Pfam; PF00400; WD40; 14.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 14.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF50998; Quinoprotein alcohol dehydrogenase-like; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50104; TIR; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 12.
DR PROSITE; PS50082; WD_REPEATS_2; 14.
DR PROSITE; PS50294; WD_REPEATS_REGION; 14.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000267223};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT TRANSMEM 599..619
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..147
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
FT REPEAT 680..714
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 721..755
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 762..796
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 803..837
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 844..878
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 885..918
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 926..960
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 966..1000
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1007..1041
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1048..1082
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1089..1123
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1130..1164
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1171..1205
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 1212..1243
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 1278 AA; 142699 MW; 83A7E201A0DB9706 CRC64;
MNSIFISYRR DDGIDTAQLL QISLQKIFGE EAVFLDTNTM KPGDEFPAYL QSAMGNAKVV
IVMIGKNWKG SNPQQNRLAN EDDWVRKELE MALQKTDARK KIFPVLVKGA TITDSFKDLP
PSLQKLSEYN CATLREKEFS QDLLPLIPLI EAYIDVGNPL EDLPLDDESY KYPIGSPFKG
LAYFTEKDAK LFFGRGQEIR QLYNIICERN IVFFYGQSGV GKSSLLFAGL KPRMNFKGWN
IVYFRRETGV NLANKLHEYT SNLKSTDKQL VILDQVEEIY TNPSAEFSSQ EESAQLFKEV
KLGAETNINM ILSFRKEYLA EFKNLFVNLE VEDFYLKPLQ ANGVLDAIRG VTQEQKARDI
YQLQFGDKTV PATIAQAILS DEQSQVAPLL QILLRKMWDK VSDKKPRIFT KDLFNEVKSS
SLLTLINDQI VAVGVKFPEE VASGLVLDIL YFFTTPRGTS ASHTEEEVFQ RYESNLTSGL
VTELKNKYLL TEPKEENDSV ARLAHDSLAP IIREMFSNST LPGQRASILL DSKKYEIENL
PDKVEFSKAD LSIIDAGKAG MRKCTNSESR EIEESRQRIK IDEQQREETK IKQLKRTRIF
SVAISILALI AAIIAIIAFR QNELADSNRL LSEARLALEN NDASLALRLA EASIKMYSDS
VNVAFATSTY INNSFYSTEF KGHSDWINSV AFSPDGKHIL TGSADSTAQL WDLKGNMIQG
FKGHSGEVYS VAFSPDGQWI LTGSEDSTAR LWNLKGTMIR EFKGHSGEVY SVAFSPDGKM
VLTGSEDNTA RLWNLNGTVA QEFKGHSGEV TSVAYSPDSV HILTGSSDST ARLWDLKGTM
IREFKGHAGK ISCVTFSPDG KQILTGSYDS TARLWNLKGT MIQEFRGHSG EIYSVAFSSD
GKNILTGSYD HTARVWNLGG FTIQVFKDHS QVVMSVAFSP DSVHILTASG DGTAHLWNLK
KMIREFKGQV GLVYSVVFSP DSIHILSRSD NGTIRLWDLK GTMICEFKSE RGWVNSMAFS
PDGKQILTGA FDSTARLWDL KGTLIQEFKG HNGWVNSVAF SPDGKEVLTG SSDSTARLWN
LKGIMIQKFR DHSEEIYSVA FSSDGKNVLT GSSDNIARLW DLNGTIIHEF KGHSGRVTSV
TFSPDSKCLL TGSYDGTARL WNLKGKMIRE FTGGSGNVFS VAFSPDGKYI LTSCSDRTAR
LWNLQGTLIQ TFQGFSNLVS SVAFSPNGKY VLTGSFDQSV RLWAIVPYDE YLKSDKIASL
TPEQKKQYGI GKSLFGWK
//
