ID A0A3N0VLP9_9GAMM Unreviewed; 778 AA.
AC A0A3N0VLP9;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:ROH93644.1};
GN ORFNames=ED208_03740 {ECO:0000313|EMBL:ROH93644.1};
OS Stagnimonas aquatica.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Nevskiales; Nevskiaceae;
OC Stagnimonas.
OX NCBI_TaxID=2689987 {ECO:0000313|EMBL:ROH93644.1, ECO:0000313|Proteomes:UP000282106};
RN [1] {ECO:0000313|EMBL:ROH93644.1, ECO:0000313|Proteomes:UP000282106}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=THS-13 {ECO:0000313|EMBL:ROH93644.1,
RC ECO:0000313|Proteomes:UP000282106};
RA Chen W.-M.;
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROH93644.1}.
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DR EMBL; RJVO01000001; ROH93644.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N0VLP9; -.
DR InParanoid; A0A3N0VLP9; -.
DR Proteomes; UP000282106; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000282106}.
FT DOMAIN 654..723
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 722..778
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 778 AA; 84526 MW; 05C0F9E884DD08D0 CRC64;
MTAAADVRNQ ILRTIASEIA AQPRQVEAAV ALLDEGATVP FIARYRKEIT GGLDDTQLRR
LEERLGYLRE LEDRRAAVIE SIRGQGKLSE ALEAQLLAAG SKAEVEDLYL PYKPKRRTRA
EIARERGLEP LADLLYRDRQ QLPAEAAAAF VQGEVADVKA ALEGARDILS ERFAEDAVLL
GRLRQYLRER GVLRSRLMEG KAEAGAKYSD YFDHAEPWAR VAGHRALAMM RGRNEEILML
DLEIDADDPA PIKPVERMIA EQHQIRPEAG AAEAWLQEVA RWCWRVKLSL SLTVDLMMEL
RARAEAEAIE VFARNLKDLL LAAPAGSRST LGLDPGIRTG VKAAVVDGTG KLLETATVYP
FQPRNDVRGA QAELARLIKL HGVQLIAIGN GTASRETEKL VAELLPALPE PRPRAVVVSE
AGASVYSASE LAATEFPQLD VSLRGAVSIA RRLQDPLAEL VKIDPKSIGV GQYQHDVDQY
RLAKSLDAVV EDAVNAVGVD LNTASASLLA RVSGLGSSLA ESIVFHRDQH GAFQSRQQLL
NVSRLGPKTF EQCAGFLRIR DGVEPLDASS VHPEAYAVAQ RIVAACGREL KSLMGDSAAL
KQLDARQFAD ERFGLPTVRD ILLELEKPGR DPRPEFRTAQ FAEGINELKD LLPGMVLEGT
VTNVAAFGAF VDIGVHQDGL VHVSQLADKF VKNPHEVVKA GQIVKVRVVE VDLKRQRIAL
SMKKDDGSAS SRTPAAAEAR GDARGRGAPP ARGSKPPRAA PAPQGSLGAA LADALKRR
//
