ID A0A3N1ASW8_9ACTN Unreviewed; 382 AA.
AC A0A3N1ASW8;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=RNA polymerase sigma-B factor {ECO:0000313|EMBL:ROO59903.1};
GN ORFNames=EDC02_1749 {ECO:0000313|EMBL:ROO59903.1};
OS Micromonospora sp. Llam0.
OC Bacteria; Actinomycetota; Actinomycetes; Micromonosporales;
OC Micromonosporaceae; Micromonospora.
OX NCBI_TaxID=2485143 {ECO:0000313|EMBL:ROO59903.1, ECO:0000313|Proteomes:UP000275308};
RN [1] {ECO:0000313|EMBL:ROO59903.1, ECO:0000313|Proteomes:UP000275308}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Llam0 {ECO:0000313|EMBL:ROO59903.1,
RC ECO:0000313|Proteomes:UP000275308};
RA D'Agostino P.;
RT "Genome mining of underrepresented organisms for secondary metabolites.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROO59903.1}.
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DR EMBL; RJJY01000001; ROO59903.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N1ASW8; -.
DR OrthoDB; 9804285at2; -.
DR Proteomes; UP000275308; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR CDD; cd07043; STAS_anti-anti-sigma_factors; 1.
DR Gene3D; 1.20.120.1810; -; 1.
DR Gene3D; 3.30.750.24; STAS domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014322; RNA_pol_sigma-B/F/G.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR002645; STAS_dom.
DR InterPro; IPR036513; STAS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02980; SigBFG; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30385:SF4; RNA POLYMERASE SIGMA-F FACTOR; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR Pfam; PF13466; STAS_2; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR SUPFAM; SSF52091; SpoIIaa-like; 1.
DR PROSITE; PS50801; STAS; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000275308};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 281..382
FT /note="STAS"
FT /evidence="ECO:0000259|PROSITE:PS50801"
SQ SEQUENCE 382 AA; 41586 MW; DDDB242DB3DAAD57 CRC64;
MSGQKRTVTR SEHALEDLDG AALSYAARFA DQAESRRRDL RAELVQLALP FAGRLARRYR
GRGEPLEDLE QVARLGLVKA VDRYDPDRGS FTAYAAVTIT GEIKRHFRDR TWGVHVPRRL
QDLTIEVSQA TAVLTSELSR SPTVAELAAR LDTSEEDILA ALESAAGYTP ASLNGPVGDD
GPAELGDMFG ALDADLESVD DRLTVSGLLY RLPARERRIL AMRFYGNYTQ SDIAAEFGIS
QMHVSRLLSR TLTWLRQAML TDAPPRWESG IAQPEPTDAA LTVSVRRVDG RTEIGLTGEL
DREAAERVRA GLVDAVRAAG TDAEVLVDLD GVGFVDAAGI AALLASHEAA RRAAVRLRFV
RPQPYVRRSL TVAGLAPLFA VA
//
