ID A0A3N1MQJ2_9MICO Unreviewed; 1306 AA.
AC A0A3N1MQJ2;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=ATP-dependent helicase HrpA {ECO:0000313|EMBL:ROQ03216.1};
GN ORFNames=EDF54_3458 {ECO:0000313|EMBL:ROQ03216.1};
OS Rathayibacter sp. PhB93.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Rathayibacter.
OX NCBI_TaxID=2485103 {ECO:0000313|EMBL:ROQ03216.1, ECO:0000313|Proteomes:UP000270764};
RN [1] {ECO:0000313|EMBL:ROQ03216.1, ECO:0000313|Proteomes:UP000270764}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PhB93 {ECO:0000313|EMBL:ROQ03216.1,
RC ECO:0000313|Proteomes:UP000270764};
RA Whitman W.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing
RT to study the core and pangenomes of soil and plant-associated
RT prokaryotes.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROQ03216.1}.
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DR EMBL; RJLA01000017; ROQ03216.1; -; Genomic_DNA.
DR Proteomes; UP000270764; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 2.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:ROQ03216.1};
KW Hydrolase {ECO:0000313|EMBL:ROQ03216.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 23..183
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 227..398
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 430..466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1306 AA; 145704 MW; E29AD9229EE1CE18 CRC64;
MSDVLSIRYP PELPVSARRD DIAAAIRDHQ VVIVAGATGS GKTTQLPKIC LELGRESIAH
TQPRRIAART IAERIAEELD DEVGGIVGYQ VRFTDKASAS TRIKLMTDGI LLNEMNHDRM
LSRYDTIIID EAHERSLNID FLLGYLHRLL PRRPDLKLII TSATIDPQSF AEHFRDAAGE
PAPIIEVSGR TYPVEIRYRP LVAEEPEEED DTDVPDATSG SRDLMTGIAD ALAELAREDQ
GDVLVFLSGE NEIRDAEDAI RGRNLPGTEV LPLYGRLSAA DQHRVFERGR TPGVRRRVVL
ATNVAETSLT VPGIRYVIDG GTARISRYSA RSKVQRLPIE AISQASANQR SGRSGRTSAG
IAIRLYSEED FERRPEFTDP EILRTGLAAV ILQMISLGLG DIAGFPFLTP PDSRGIKDGL
DLLTELGALR SPATPADSPS RDATYEGDTP QKRVTSGISR GTGAEKAPQL TRIGRDLARL
PIDPRFGRMV IESRKHDVSR EVMAIVAGLT IQDVRERPLE RRAQADQQHA RFVDPTSDFL
TLLNLWNYVE EKQAELSSSA FRRLCKAEYL NYLRVREWQD VFRQLRQLAR PLKLELGEPK
VDPDGIHRSL LAGLLSHLGI KDTTSQQAQR AAKNRERQSV QYVGARNAKF SIFPGSALAK
KQPDALMSAE LVETSKLFAR SNAAIDPAWA EAIAGDLVKR QFSEPHWEKA QGAAVAYEKV
TLYGVPIIAR RRVQFSRIDA GYARELFIRH ALVEGEWDAR HAFDRKNRAL RAELERLEER
TRRRDLLVDD EAVFDFYDRR VPRDITSVRS FDSWWRTAQH DEPDLLTMTQ ETLLPEDAEQ
IDETAFPTQW RQADQRFRLS YRFEPGTEED GVTVHVPLAL LPRVTPLGFD WLVPGLRAEL
VTAMIKALPK HLRRNVVPAN DWARKLTAAL PQDVPNPPTE SFAATLAGAI RREAGVVIGA
SDFDLERIPA HLRVTFAIAD ERGRTVAAGK ELAPLAERLR GRVRDEVARV VEARVPDALE
RRGIKTWDMA ELPRVTDTRQ GGNTIRAYPA LIDDGDSVSI RLLATAEDQA REHPRGVRRL
LLLATPSPVA YVQQYLTANE KLVLAQSPYQ NTTALFGDCL LACVDAVLWR MKPDGMLFLR
AEFDAVRDRV SGSVMDSMFE TVKTVTTILT TARGVEKALK ASTSMALLPA LTDAREQLTG
LVHPGFVSAT GLERLRHLPR YLAGITERFG KIGENVGRDR VWLNEVQAAQ ELYRSAGGTI
PLPPHAPERL VRARWLIEEL RISFFAQSLG TVESVSLQRI RKVLAG
//