ID A0A3N1P9B0_9GAMM Unreviewed; 352 AA.
AC A0A3N1P9B0;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE SubName: Full=AraC family transcriptional regulator {ECO:0000313|EMBL:ROQ21306.1};
GN ORFNames=EDC38_1929 {ECO:0000313|EMBL:ROQ21306.1};
OS Marinimicrobium koreense.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC Cellvibrionaceae; Marinimicrobium.
OX NCBI_TaxID=306545 {ECO:0000313|EMBL:ROQ21306.1, ECO:0000313|Proteomes:UP000273643};
RN [1] {ECO:0000313|EMBL:ROQ21306.1, ECO:0000313|Proteomes:UP000273643}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16974 {ECO:0000313|EMBL:ROQ21306.1,
RC ECO:0000313|Proteomes:UP000273643};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROQ21306.1}.
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DR EMBL; RJUK01000001; ROQ21306.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N1P9B0; -.
DR OrthoDB; 345413at2; -.
DR Proteomes; UP000273643; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF6; RCS-SPECIFIC HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RCLR; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000273643};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 39..57
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 69..89
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 101..119
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 131..150
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 162..182
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 188..211
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 243..347
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 352 AA; 39454 MW; ED0E16BBE4317F54 CRC64;
MLLTTLALLD VALRAATIGQ LVLLVGVGLN RKPIREGTLL LLAAIACGIA YLLLTAPVPD
AAYGMIRNIL LLLTDAWAYA LWLAAMYFFQ EGFSVRHTPI WVRPFVIVWI AWHLYFFGFR
GGDGIYHQIN HGLSILILAH IIYTALTGLS DDLVDKRRRL RLMLSGALAA YGVMLAIDQL
WLGRQLQSAT LSLANATLVF ASVTWFSVYL LRTNKGSVIP EPDSGFDTRS QTALPHEYVN
LKRALDDFIE RGDYMQPELD IASMASQLGD KEHRLRRLIN RQLGFQNFSG FLNQLRIQKA
RQWLASPQHA STPIMNIALD LGYGSIGPFN RAFKRSTGLT PTQYRAQFHN QP
//
