ID A0A3N1Q935_9MICO Unreviewed; 273 AA.
AC A0A3N1Q935;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE SubName: Full=RNA polymerase sigma factor for flagellar operon FliA {ECO:0000313|EMBL:ROQ37333.1};
GN ORFNames=EDF46_2789 {ECO:0000313|EMBL:ROQ37333.1};
OS Frondihabitans sp. PhB188.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Frondihabitans.
OX NCBI_TaxID=2485200 {ECO:0000313|EMBL:ROQ37333.1, ECO:0000313|Proteomes:UP000269803};
RN [1] {ECO:0000313|EMBL:ROQ37333.1, ECO:0000313|Proteomes:UP000269803}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PhB188 {ECO:0000313|EMBL:ROQ37333.1,
RC ECO:0000313|Proteomes:UP000269803};
RA Whitman W.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing
RT to study the core and pangenomes of soil and plant-associated
RT prokaryotes.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROQ37333.1}.
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DR EMBL; RJUO01000004; ROQ37333.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N1Q935; -.
DR OrthoDB; 9799825at2; -.
DR Proteomes; UP000269803; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.20.140.160; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30385:SF7; RNA POLYMERASE SIGMA FACTOR FLIA; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
PE 4: Predicted;
KW Cell projection {ECO:0000313|EMBL:ROQ37333.1};
KW Cilium {ECO:0000313|EMBL:ROQ37333.1};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Flagellum {ECO:0000313|EMBL:ROQ37333.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000269803};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..80
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 169..216
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
SQ SEQUENCE 273 AA; 29377 MW; BD61AA3F3BD85073 CRC64;
MNKTERNTMV VQNLPLVGYL VSEVCAKATH LSRDDLASAG ALALVQAADA FDPTQGVPFG
AYARTRIMGA FADDMRSSDW ASRATRKRIK ETLATQETLT AALGRTPNVD EIASSLGVDR
QTAADALTDA SRTVSAIDET VADQLAADII LPEETLLEQE RTRYLRAAVD ALPEKMRFII
ENVYFGDRSV TEVAEELGIT HSAVSQQRTE AIRLLRDGLN THYASDDNAE VVHESRTAPA
RRAAYLARVA GNAVAGIGIA LHDAEAPRVA VAS
//
