ID A0A3N1XIF7_9BURK Unreviewed; 495 AA.
AC A0A3N1XIF7;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=EC845_0866 {ECO:0000313|EMBL:ROR24832.1};
OS Comamonas sp. BIGb0124.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Comamonas.
OX NCBI_TaxID=2485130 {ECO:0000313|EMBL:ROR24832.1, ECO:0000313|Proteomes:UP000267274};
RN [1] {ECO:0000313|EMBL:ROR24832.1, ECO:0000313|Proteomes:UP000267274}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BIGb0124 {ECO:0000313|EMBL:ROR24832.1,
RC ECO:0000313|Proteomes:UP000267274};
RA Samuel B.;
RT "Genomic analyses of the natural microbiome of Caenorhabditis elegans.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROR24832.1}.
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DR EMBL; RJVF01000008; ROR24832.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N1XIF7; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000267274; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 2.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000267274};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 495 AA; 54849 MW; 31E8FE6256960FCD CRC64;
MRKIFMGVRL RRLREEHGLT QAALARQLGL SASYFNQIEQ NQRPMTLALL LRLGAALDID
VQSFSEDEET RMVSALGEVF ANLPASAVGR GTDDAHVSQA EIREIAASMP AVGRAFIQLH
RRHREAVERL EALSETLGAQ GQDGTGQAGM QPLPYEEVRD FFFTHHNHFA ELDMDAERCF
SDWGLHGLPP LRLADRLAER LQTRHGIAVR YTEGIDQGLG IAGLHPEDGL HESAQAWPGS
EPLPPTGQLA LAQHLDPGQH AFQMAQRLAL LERGGVLERM ADDPRFSGEQ GRRLVRSGLA
SYFAAALLLP YGRFLEAAEA LHYDIDLLGQ RFGVSFETVC HRLSTMQRPH ATGVPFFFIR
VDRAGNISKR QSATHFHFSR VGGTCPLWNV YEAFSHPGRI LRQLARMPDG RTYLLIARTV
IRRTPGFGEP DKVFAVALGC DVAHAHRLVY AKGLDLLDPA AATPIGMGCK VCERPACPQR
AFPYIGRMRQ DAVPP
//
