ID A0A3N2DZF1_9GAMM Unreviewed; 579 AA.
AC A0A3N2DZF1;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 15.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=EDC56_0733 {ECO:0000313|EMBL:ROS05204.1};
OS Sinobacterium caligoides.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Cellvibrionales;
OC Spongiibacteraceae; Sinobacterium.
OX NCBI_TaxID=933926 {ECO:0000313|EMBL:ROS05204.1, ECO:0000313|Proteomes:UP000275394};
RN [1] {ECO:0000313|EMBL:ROS05204.1, ECO:0000313|Proteomes:UP000275394}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 100316 {ECO:0000313|EMBL:ROS05204.1,
RC ECO:0000313|Proteomes:UP000275394};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROS05204.1}.
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DR EMBL; RKHR01000003; ROS05204.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N2DZF1; -.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000275394; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ROS05204.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ROS05204.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000275394}.
FT DOMAIN 74..233
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 322..451
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 469..574
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 579 AA; 62539 MW; 1E6D49D5B126F5D3 CRC64;
MSKTILRRQV RDADIDALMA EGSDSLLSRI YASRGVTSQR ELERELAGML APSGLKDMDK
AVAMLADAVQ RQLNVVVIGD YDADGATSSA LAILALRAMG LMTASYLVPN RFSHGYGLTP
RLVDEALAQG AELLVTVDNG IAAIEGVEAA HKAGIKVIVT DHHLPGEVLP QADAIVNPVQ
PGCGFASKCI AGVGVIFYVM VALRAELRQR GWFSAEQAMP NMADFLDIVA LGTVADVVPL
DKNNRILVHQ GLARIRAGKA RPGILKILEL AKRSPHRVVA SDMGFAIGPR LNAAGRLDDM
SLGVECLMTS DAIRAAEIAA ELDDLNKDRR SIESSMQAEA DNVLAKLQLN EQELPWGICL
FDKDWHEGVI GILASRIKDK QHRPVIIFAQ GDDGAVKGSG RSIAGLHMRD ALAAVDSAHP
GLIIKFGGHA MAAGLTIAPE DYPRFCQLFD AEVRRRLTET ELQAVILSDG ELAADQFSLS
LAHQLREAGP WGQHFPEPIF DGEFTLVQQR LLGGSHLKMV LAPNGFDGLL IDAIAFNVDV
KLWPNLALNK VRLAYKLDVN EFRGKQSVQL LVEHLEAVS
//