ID A0A3N2JPF4_9CELL Unreviewed; 291 AA.
AC A0A3N2JPF4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=RNA polymerase sigma-70 factor (ECF subfamily) {ECO:0000313|EMBL:ROS75264.1};
GN ORFNames=EDF32_1672 {ECO:0000313|EMBL:ROS75264.1};
OS Cellulomonas sp. PhB143.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Cellulomonadaceae;
OC Cellulomonas.
OX NCBI_TaxID=2485186 {ECO:0000313|EMBL:ROS75264.1, ECO:0000313|Proteomes:UP000276333};
RN [1] {ECO:0000313|EMBL:ROS75264.1, ECO:0000313|Proteomes:UP000276333}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PhB143 {ECO:0000313|EMBL:ROS75264.1,
RC ECO:0000313|Proteomes:UP000276333};
RA Whitman W.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing
RT to study the core and pangenomes of soil and plant-associated
RT prokaryotes.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Interacts transiently with the RNA polymerase catalytic core
CC formed by RpoA, RpoB, RpoC and RpoZ (2 alpha, 1 beta, 1 beta' and 1
CC omega subunit) to form the RNA polymerase holoenzyme that can initiate
CC transcription. {ECO:0000256|ARBA:ARBA00011344}.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROS75264.1}.
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DR EMBL; RKIJ01000012; ROS75264.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N2JPF4; -.
DR OrthoDB; 3211555at2; -.
DR Proteomes; UP000276333; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 3.10.450.50; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR032710; NTF2-like_dom_sf.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30173:SF43; ECF RNA POLYMERASE SIGMA FACTOR SIGI-RELATED; 1.
DR PANTHER; PTHR30173; SIGMA 19 FACTOR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF54427; NTF2-like; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000276333};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..68
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 101..151
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 291 AA; 31252 MW; FC1FD37308E9B9D3 CRC64;
MGQTEIFEGE RTRLVGIAAR VLGDRTEAED VVQQAWLRLH RTDADIENLP AWLTTVTTRL
CLDRLRARVP APVGEVAESA TSAGTPDPAD AVALAATVGA ALQVVLDRLS PQERVAFVLH
DSFGFEFSAV AAVLGTTPVA ARKLASRARA KVAQPAHEDA LATWEVVDAF MAAAREGDFD
RLLRLLAPDA VVTADDAAIR VGTPGRIEGP REVATFFDGS ARAALAVFAD DRPGAAWFHR
GEARVLFDFA VSGGLVRGIT FRAEPEVLAR VVRRDGAERQ RRPGQPRPGQ H
//
