ID A0A3N2Q6U3_9PEZI Unreviewed; 983 AA.
AC A0A3N2Q6U3;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=116 kDa U5 small nuclear ribonucleoprotein component {ECO:0000256|ARBA:ARBA00018774};
DE AltName: Full=U5 snRNP-specific protein, 116 kDa {ECO:0000256|ARBA:ARBA00031432};
GN ORFNames=SODALDRAFT_341789 {ECO:0000313|EMBL:ROT42335.1};
OS Sodiomyces alkalinus F11.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Sodiomyces.
OX NCBI_TaxID=1314773 {ECO:0000313|EMBL:ROT42335.1, ECO:0000313|Proteomes:UP000272025};
RN [1] {ECO:0000313|EMBL:ROT42335.1, ECO:0000313|Proteomes:UP000272025}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F11 {ECO:0000313|EMBL:ROT42335.1,
RC ECO:0000313|Proteomes:UP000272025};
RX PubMed=30368956; DOI=10.1111/mec.14912;
RA Grum-Grzhimaylo A.A., Falkoski D.L., van den Heuvel J.,
RA Valero-Jimenez C.A., Min B., Choi I.G., Lipzen A., Daum C.G., Aanen D.K.,
RA Tsang A., Henrissat B., Bilanenko E.N., de Vries R.P., van Kan J.A.L.,
RA Grigoriev I.V., Debets A.J.M.;
RT "The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has
RT shifted to a protein diet.";
RL Mol. Ecol. 27:4808-4819(2018).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; ML119051; ROT42335.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N2Q6U3; -.
DR STRING; 1314773.A0A3N2Q6U3; -.
DR OrthoDB; 166721at2759; -.
DR Proteomes; UP000272025; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd04098; eEF2_C_snRNP; 1.
DR CDD; cd04090; EF2_II_snRNP; 1.
DR CDD; cd01683; EF2_IV_snRNP; 1.
DR CDD; cd16264; snRNP_III; 1.
DR CDD; cd04167; Snu114p; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.70.240; -; 1.
DR Gene3D; 3.30.70.870; Elongation Factor G (Translational Gtpase), domain 3; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 3.90.1430.10; Yeast translation eEF2 (G' domain); 1.
DR InterPro; IPR041095; EFG_II.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR000640; EFG_V-like.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031950; EFTUD2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR044121; Snu114_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR005517; Transl_elong_EFG/EF2_IV.
DR InterPro; IPR035655; U5-116kDa_C.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR42908:SF6; 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT; 1.
DR PANTHER; PTHR42908; TRANSLATION ELONGATION FACTOR-RELATED; 1.
DR Pfam; PF00679; EFG_C; 1.
DR Pfam; PF14492; EFG_III; 1.
DR Pfam; PF03764; EFG_IV; 1.
DR Pfam; PF16004; EFTUD2; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SMART; SM00838; EFG_C; 1.
DR SMART; SM00889; EFG_IV; 1.
DR SUPFAM; SSF54980; EF-G C-terminal domain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000272025};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 130..315
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
SQ SEQUENCE 983 AA; 109884 MW; 9EEC17B463AAD901 CRC64;
MDDLYDEFGN FIGEEAGSEE ASERGIDAGD YVYGDEASEA PGTTGQELME VDDEGPSNAI
ILHEDKQYYP TAQQVYGEEV EVLVREEDEQ LLTQPIIAPI EQKKFNIEEA DLPPVFFERS
FLTDLMNFPD QTRNVALAGH LHHGKTAFMD MLVLETHDIS ERLDRRTGKK KEEQLRYTDI
QITERERGLS TKAAPMSLVL QSTKGKSHLL NILDTPGHVN FVDEVAASLR LVDGICLVVD
VVEGVQVNTE QIIKHAVLED IPMTLIINKM DRLILELKLP PKDAYFKLKH VVEEVNTVIE
NTIPGKGEAR RLSPEKGNVL FACTSMGWCF TLQSFAKMYA NTYGNINADD FAKRLWGDVY
FNPRKRTFSR KPVDEGANRS FVNFVLEPIY KIFTHSISDS PEDLKKVLAT LGISLKPSQY
KADAHVLLKL VCEQFFGSST GFVDMVIQHI PSPSEGAEKW IQKYYTGPLD TKVAESMKSC
NQDGPLVVHV TKLFNTTDAK SFNSFGRVLS GTARPGMQVR VLGEGYSLDD EEDMVMATIQ
DVYIAETRYN IPTDGVPAGN WVLLGGVDNS IVKTATIVPP KLDDDEDAYI FKPITHFTES
VLKVAVEPVN PSELPKMLDG LRKIQKSYPL IVTKVEESGE HVILGTGELY MDCVLHDLRR
LYADMEIRVS DPVTRFCETV VEQSATKCYA ITPNKKNRIT MVAEQLDKGI SEDIESGKVR
IRDPIRKTAN YFEENYGWDK LAARSIWAFG PDEMGPNILQ DDTLPSEVDK KLLTTVKETI
RQGFSWATRE GPLCEEPIRN TKFRVTDMTL ASEAIFRGGG QIIPTSRRAC YSSFLMASPR
LMEPQYAISV TGPEDSATEV YTALARRRGH VLSDGPIPGT PLYRVNGLLP VIDSFGFETA
LRIQTQGSAM VSLVFDSWSI VPGDPLDKNV VLRPLQPANA QATARDFVLK TRRRKGLSED
VSIATFLEPE FYQTLKENGT LGD
//
