ID A0A3N3ZQB2_9MICC Unreviewed; 594 AA.
AC A0A3N3ZQB2;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=Type IV secretion system protein VirD4 {ECO:0000313|EMBL:ROZ61632.1};
GN ORFNames=EDL96_12815 {ECO:0000313|EMBL:ROZ61632.1};
OS Kocuria soli.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Micrococcaceae;
OC Kocuria.
OX NCBI_TaxID=2485125 {ECO:0000313|EMBL:ROZ61632.1, ECO:0000313|Proteomes:UP000270616};
RN [1] {ECO:0000313|EMBL:ROZ61632.1, ECO:0000313|Proteomes:UP000270616}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M5W7-7 {ECO:0000313|EMBL:ROZ61632.1,
RC ECO:0000313|Proteomes:UP000270616};
RA Tuo L.;
RT "Kocuria sp. M5W7-7, whole genome shotgun sequence.";
RL Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ROZ61632.1}.
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DR EMBL; RKMF01000020; ROZ61632.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N3ZQB2; -.
DR OrthoDB; 226701at2; -.
DR Proteomes; UP000270616; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR032689; TraG-D_C.
DR InterPro; IPR003688; TraG/VirD4.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR Pfam; PF12696; TraG-D_C; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000270616};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 75..97
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 423..541
FT /note="TraD/TraG TraM recognition site"
FT /evidence="ECO:0000259|Pfam:PF12696"
FT REGION 507..529
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 512..526
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 594 AA; 63341 MW; D44E2F497C120A1D CRC64;
MQRDDDTMWA MILGVFFGGL ALIWAAIMGS ASVMTLMQCR ALPENKGPGA VVGFFGQGRE
SLATETGCEP SVAGMWSLLI VMLGLLVAAI VVAVMAWSRW KESDRRFLGD VKGRDGIAKA
REVSKRVGAP ALMSKAATVR PSVKDPKPCQ VGLLIGMSQG KPVWISMEDS VVLIGPPRSG
KGFHIVINAL LDAPGAVVTT STRGDNVRAV WEGRKRVGPV ALFDPQGLTK MPSTLKWSPA
QGCEDPKVAA RRAEIIVGAS SMGQSTSNQE WAGVASRILQ YLLHAAAIGE VDSQTLGRWG
SSPGLAQAAV RILKESPQAA PSWGVALEED LNSDPRMLPS KWMGVTSATS SLMLPEVAEV
LNPAPGEGLD PKTFVEQKGT LFLVGTKSGG GAAAPMLIGL MDAITDQARE MAGSLPGTRL
DPPLSLILDE IANIAPWKEL PTIMSEGGGS GISTMVIIQS PAQARSVWGD HEAQQILDSA
TFTVQLGGSN NERELKRFVE LMGDRKVQER SKTYSSTGTS TGEQKHERPV MSVAELRRLP
RGTGLLLAQF SRPVLLTMSR WVDRKDAEEI KAAIKRYDAR LAQALTSGAD DVDG
//
