ID A0A3N4HH53_9BACT Unreviewed; 1119 AA.
AC A0A3N4HH53;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=TM0106 family RecB-like putative nuclease {ECO:0000313|EMBL:RPA66884.1};
GN ORFNames=EF405_19060 {ECO:0000313|EMBL:RPA66884.1};
OS Cyclobacteriaceae bacterium YHN15.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae.
OX NCBI_TaxID=2487897 {ECO:0000313|EMBL:RPA66884.1, ECO:0000313|Proteomes:UP000274029};
RN [1] {ECO:0000313|EMBL:RPA66884.1, ECO:0000313|Proteomes:UP000274029}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YHN15 {ECO:0000313|EMBL:RPA66884.1,
RC ECO:0000313|Proteomes:UP000274029};
RA Chen Z.;
RT "Cecembia caeni sp. nov.,isolated from a lake.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RPA66884.1}.
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DR EMBL; RKQB01000010; RPA66884.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N4HH53; -.
DR OrthoDB; 9757917at2; -.
DR Proteomes; UP000274029; Unassembled WGS sequence.
DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC.
DR CDD; cd17934; DEXXQc_Upf1-like; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR019993; RecB_nuclease_TM0106_put.
DR InterPro; IPR047187; SF1_C_Upf1.
DR InterPro; IPR038720; YprB_RNase_H-like_dom.
DR NCBIfam; TIGR03491; TM0106 family RecB-like putative nuclease; 1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF525; HELICASE SENATAXIN-RELATED; 1.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF13604; AAA_30; 1.
DR Pfam; PF13482; RNase_H_2; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
FT DOMAIN 316..494
FT /note="YprB ribonuclease H-like"
FT /evidence="ECO:0000259|Pfam:PF13482"
FT DOMAIN 911..1089
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
SQ SEQUENCE 1119 AA; 127154 MW; A65290EC17B1C023 CRC64;
MRFLANQIIY SPTDLANHIS CGHLTQLNKL AAFGELEKPH TYSRVLEMLR QKGISFEDQF
LEQLKAEGKS IVIISRESKI AHKEVIEAMA LGVDVIYQAK LTEEDEWEGW ADFLIKAEGS
SIFGEWCYEV MDTKLASDTR AGTILQIGLY SEAIAKIQGV SPKYMHVKTP ESHQRYLVSD
FSAYIRLIKR KLIQAVREGE NTYPDPVPHC DICNWWERCN TQRRSDDHLA FVAGLGGSQT
KELRVQGINT LENLANVSLP VPFTPSRGAK ETYNKLREQA RVQFQSRVDN KLIYEFLELV
PDTGFFKLPE PSPNDIYLDL EGDPMVEPSG IEYLVGWVHQ GQYYHIWAEN SKKEMEAFES
FMDFVITLKS QDPSCHIYHY APYEPVAFKR LMGKYATRED EMDYLLRSGT FIDLYGVVRQ
SIRASVEKYS IKDLEPFYGY HRKIDLRELS SLKADYEYLL EIGMAQEATD IMRNAIQVYN
EDDCRSTQIL HEWLESLRLS LSEEGINIPR PELVSGEAGE GVTAHQERIR PIMESLLIGI
PFDQEDRNQK QQANFILAHM LDWYRREKKS FWWEYFRLID LPDHELLEER GALAYLDFTG
ERESVKKSVI DTYHFPSQEF DIRVGMSLKT QDEGTLGTVE SIDPQNRLIR IKKGPSKADY
HPISVFSIDN IRLSDKEVAI IELAEWVLEN GITSEEQQFS AGRQLLLRTS PRVIETPVWS
EDNVEYAHEW AKKLNHSVLP IQGPPGTGKS HTAGHVIVGL LKEGKKVGIT ALSHKVITNL
MIKVKEVAEK TGFELQMIQK SSKGNQTEWL PWTTTENKAE ILSKMDKVHV IGGTSFLWCL
PDFRDSVDYL FVDEAGQLSL IDTLAISGAC KNMVLLGDPQ QLQQPQKGVH PQGTEVSALG
HLLNGNQTIL NEQGIFLDKT WRMHPDINAL VSEMFYEGKL LSVEGLENQR IEGETTINGS
GLRYLEVNHE GNTNSSAEEV SKIVLLVNEL LGSKVQSVDK EGKGKILTES DIRIITPYNA
QVELLKEALP NIDIGTVDKF QGQQAEIIIY SLATSDPQDA PRGMDFLYSP NRFNVAISRA
KALFIMIASP MIFEPECKSP VQIKLANPFC RFRECAGEI
//
