ID A0A3N4Q0Y2_9BACT Unreviewed; 211 AA.
AC A0A3N4Q0Y2;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=RNA polymerase sigma-70 factor {ECO:0000313|EMBL:RPE05424.1};
GN ORFNames=EGT74_23855 {ECO:0000313|EMBL:RPE05424.1};
OS Chitinophaga lutea.
OC Bacteria; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae;
OC Chitinophaga.
OX NCBI_TaxID=2488634 {ECO:0000313|EMBL:RPE05424.1, ECO:0000313|Proteomes:UP000278351};
RN [1] {ECO:0000313|EMBL:RPE05424.1, ECO:0000313|Proteomes:UP000278351}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ZY74 {ECO:0000313|EMBL:RPE05424.1,
RC ECO:0000313|Proteomes:UP000278351};
RA Zong Y.;
RT "Chitinophaga lutea sp.nov., isolate from arsenic contaminated soil.";
RL Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RPE05424.1}.
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DR EMBL; RPDH01000003; RPE05424.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N4Q0Y2; -.
DR OrthoDB; 659361at2; -.
DR Proteomes; UP000278351; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014327; RNA_pol_sigma70_bacteroid.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02985; Sig70_bacteroi1; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF46; RNA POLYMERASE SIGMA FACTOR SIGY; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000278351}.
FT DOMAIN 28..91
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 125..177
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 211 AA; 24374 MW; 645584678FEACB17 CRC64;
MRSGKTSVNT LWQKVWQEND QRAFEELFHG CYQRLVRFAE EYVNSHESAE EIVSDIFMKL
WAGRDTYQDV LHIEKYLFTA VRNQSLNYLR KFSGYRVVAT EEAGQLNIVS SHDPYKASEW
KELLARLDAA VEMLPPRRRK IFRLIREEGF KPKEVAEIMN LSHRTVETQL FNAVKTLHAE
LQPYLTARRK SAPAGGVDAA LVLTLLLSAQ G
//