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Database: UniProt
Entry: A0A3N4VBY4_9RHOB
LinkDB: A0A3N4VBY4_9RHOB
Original site: A0A3N4VBY4_9RHOB 
ID   A0A3N4VBY4_9RHOB        Unreviewed;       445 AA.
AC   A0A3N4VBY4;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   SubName: Full=Two component Fis family sigma54 specific transcriptional regulator {ECO:0000313|EMBL:RPE71330.1};
GN   ORFNames=EDD53_0446 {ECO:0000313|EMBL:RPE71330.1};
OS   Pacificibacter maritimus.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Roseobacteraceae; Pacificibacter.
OX   NCBI_TaxID=762213 {ECO:0000313|EMBL:RPE71330.1, ECO:0000313|Proteomes:UP000269689};
RN   [1] {ECO:0000313|EMBL:RPE71330.1, ECO:0000313|Proteomes:UP000269689}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 104731 {ECO:0000313|EMBL:RPE71330.1,
RC   ECO:0000313|Proteomes:UP000269689};
RA   Goeker M.;
RT   "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT   most valuable type-strain genomes for metagenomic binning, comparative
RT   biology and taxonomic classification.";
RL   Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RPE71330.1}.
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DR   EMBL; RKQK01000001; RPE71330.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3N4VBY4; -.
DR   OrthoDB; 9802388at2; -.
DR   Proteomes; UP000269689; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd17549; REC_DctD-like; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.40.50.2300; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR011006; CheY-like_superfamily.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00072; Response_reg; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00448; REC; 1.
DR   SUPFAM; SSF52172; CheY-like; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS50110; RESPONSE_REGULATORY; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Phosphoprotein {ECO:0000256|PROSITE-ProRule:PRU00169};
KW   Reference proteome {ECO:0000313|Proteomes:UP000269689};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Two-component regulatory system {ECO:0000256|ARBA:ARBA00023012}.
FT   DOMAIN          6..120
FT                   /note="Response regulatory"
FT                   /evidence="ECO:0000259|PROSITE:PS50110"
FT   DOMAIN          146..360
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
FT   MOD_RES         55
FT                   /note="4-aspartylphosphate"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00169"
SQ   SEQUENCE   445 AA;  49274 MW;  7E9926C53945484D CRC64;
     MATAMKIAIV DDEQDMRQSI SQWLALSGFD TETFASAEEA LKALSPDYPG AIISDIKMPG
     MDGMQFLRKL MSVDSGLPVI MITGHGDVPM AVEAMRVGAF DFLEKPFNPD RMTELAKKAT
     NARRLTLDNR ALRRELSDGT GIMKKLIGAS PVMERLREDI LDLGQADGHV LIEGETGTGK
     TLVAHALHAV GGRASKKFVT FSCAGREEHE LAKRLFGPDP DGQIMPLIEE ARGGTLVLED
     IEALPVDLQA RLLSWMDDQG TPPETRVVAI CNLQEQGKTC ESTLRPDLYF RLAAMKITLP
     PLRARGEDIL LLFTHLSQQF SEEYGCDTRE VSAQEAAQLL QAPWPGNIRQ LINVAERAVL
     QNRRGSGSIA SLLLSEGDDV EQQTMTTEGK PLKEYVEAFE RMLIDNTMRR HKGSIVSVME
     ELCLPRRTLN EKMAKYSLQR SDYLG
//
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