ID   A0A3N5CU08_9SPHN        Unreviewed;       780 AA.
AC   A0A3N5CU08;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   RecName: Full=LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411};
DE   Flags: Precursor;
GN   Name=lptD {ECO:0000256|HAMAP-Rule:MF_01411};
GN   ORFNames=EG799_04140 {ECO:0000313|EMBL:RPF70900.1};
OS   Aurantiacibacter spongiae.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Erythrobacteraceae; Aurantiacibacter.
OX   NCBI_TaxID=2488860 {ECO:0000313|EMBL:RPF70900.1, ECO:0000313|Proteomes:UP000275232};
RN   [1] {ECO:0000313|EMBL:RPF70900.1, ECO:0000313|Proteomes:UP000275232}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HN-E23 {ECO:0000313|EMBL:RPF70900.1,
RC   ECO:0000313|Proteomes:UP000275232};
RA   Zhuang L., Luo L.;
RT   "Erythrobacter spongiae sp. nov., isolated from a marine sponge.";
RL   Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Involved in the assembly of lipopolysaccharide (LPS) at the
CC       surface of the outer membrane. {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBUNIT: Component of the lipopolysaccharide transport and assembly
CC       complex. {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- SIMILARITY: Belongs to the LptD family. {ECO:0000256|HAMAP-
CC       Rule:MF_01411}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|HAMAP-Rule:MF_01411}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RPF70900.1}.
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DR   EMBL; RPFZ01000001; RPF70900.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3N5CU08; -.
DR   OrthoDB; 9760225at2; -.
DR   Proteomes; UP000275232; Unassembled WGS sequence.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0015920; P:lipopolysaccharide transport; IEA:InterPro.
DR   GO; GO:0010033; P:response to organic substance; IEA:InterPro.
DR   Gene3D; 2.60.450.10; Lipopolysaccharide (LPS) transport protein A like domain; 1.
DR   HAMAP; MF_01411; LPS_assembly_LptD; 1.
DR   InterPro; IPR020889; LipoPS_assembly_LptD.
DR   InterPro; IPR007543; LptD_C.
DR   PANTHER; PTHR30189; LPS-ASSEMBLY PROTEIN; 1.
DR   PANTHER; PTHR30189:SF1; LPS-ASSEMBLY PROTEIN LPTD; 1.
DR   Pfam; PF04453; LptD; 1.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|HAMAP-Rule:MF_01411};
KW   Membrane {ECO:0000256|HAMAP-Rule:MF_01411};
KW   Reference proteome {ECO:0000313|Proteomes:UP000275232};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01411}.
FT   SIGNAL          1..35
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT   CHAIN           36..780
FT                   /note="LPS-assembly protein LptD"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01411"
FT                   /id="PRO_5018341215"
FT   DOMAIN          340..706
FT                   /note="LptD C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF04453"
SQ   SEQUENCE   780 AA;  86314 MW;  486A6F96DF4BF5D4 CRC64;
     MPIGQPFAPQ AVPLRLPLAG IVAALLLGLP CSVLAQAGAA PGVDTAQDNP VEDDILDARL
     PDDGSVPAPP VLPQFNAAGE RQIAFEANEL EYDSTTETVT ASGNVFIRSG DQSVRADAVT
     WNRLTGEIVA TGDIRFVDED GNQLFTDRLV LTDELEAGAM DNLLLVFQEG GRLAAEQARR
     DEAGDIALTR AAYSSCAVET GSGCPKRPSW RLTAERVTYD SATDKIRFRD AYLELFGARV
     LPLPGLTIRA GGGANSGIFI PDVGITASNG IEISDSYYMR LADNRDLTLS AYVYTEAAPM
     ASAQYRHLTG NGAFQVTGYI THGSRIPLGS QRLISEDGLR GYVFSNGRFQ IGEHWTATGS
     LRIASDRTFL RRYDISREDR IRSMVELERI DDRSYLSLSG WATQALLVDT PQGQVPLALP
     LIDARYLLDD PVLGGDIELQ ANTLAVTRGD GQDTQRAFAR AQWDLRRITR WGQEVTFTAL
     ARGDIYHSDG NALNPVPLYS GQPGWQGRAV AIGALDVKWP LIGSAFGGTQ TLTPRVQLVA
     APDIRNLAIP NEDARAIDLE DSNLFALNRF PGYDRVEDGV RLTYGIDWEV NRPGWRVETT
     VGQSYRLSDE PNLFPDGTGL NEQFSDFVGR TKIRYRDFIQ FTHRFRLDKD SFAVRRNEVD
     ATVGSARTYA EIGYLRLNRD IDPLFQDLQD REELRLAGRL AFQRYWSVFG SAVVNLTDRE
     EDPTFSADGF EPLRTRLGVA YADDCLEFGV TWRRDYIQLA DAQNGNSFRI YFRLRNLGFR
//