ID A0A3N7F0L0_POPTR Unreviewed; 708 AA.
AC A0A3N7F0L0;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 9.
DE RecName: Full=DUF4220 domain-containing protein {ECO:0000259|Pfam:PF13968};
GN ORFNames=POPTR_006G013600 {ECO:0000313|EMBL:RQO91146.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:RQO91146.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:RQO91146.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729}, and
RC Nisqually-1 {ECO:0000313|EMBL:RQO91146.1};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
RN [2] {ECO:0000313|EMBL:RQO91146.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Nisqually-1 {ECO:0000313|EMBL:RQO91146.1};
RA Tuskan G., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U.,
RA Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L.,
RA Aerts A., Bhalerao R., Bhalerao R., Blaudez D., Boerjan W., Brun A.,
RA Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J.,
RA Chen G., Cooper D., Coutinho P., Couturier J., Covert S., Cronk Q.,
RA Cunningham R., Davis J., Degroeve S., Dejardin A., Depamphilis C.,
RA Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B.,
RA Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R.,
RA Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R.,
RA Joshi C., Kangasjarvi J., Karlsson J., Kelleher C., Kirkpatrick R.,
RA Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.,
RA Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C.,
RA Nelson D., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G.,
RA Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P.,
RA Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J.,
RA Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.,
RA Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G.,
RA Yin T., Douglas C., Marra M., Sandberg G., Van De Peer Y., Rokhsar D.;
RT "WGS assembly of Populus trichocarpa.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM009295; RQO91145.1; -; Genomic_DNA.
DR EMBL; CM009295; RQO91146.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N7F0L0; -.
DR EnsemblPlants; Potri.006G013600.4.v4.1; Potri.006G013600.4.v4.1; Potri.006G013600.v4.1.
DR Gramene; Potri.006G013600.4.v4.1; Potri.006G013600.4.v4.1; Potri.006G013600.v4.1.
DR Proteomes; UP000006729; Chromosome 6.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR025315; DUF4220.
DR InterPro; IPR007658; DUF594.
DR PANTHER; PTHR31325:SF283; DUF4220 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR31325; OS01G0798800 PROTEIN-RELATED; 1.
DR Pfam; PF13968; DUF4220; 1.
DR Pfam; PF04578; DUF594; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..48
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 60..79
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 91..110
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 278..300
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 31..350
FT /note="DUF4220"
FT /evidence="ECO:0000259|Pfam:PF13968"
SQ SEQUENCE 708 AA; 80973 MW; A537CFBF6A3D7C49 CRC64;
MLLSLLLQIL LTIFGERRKY TSGRLLGTFL WVAYLSADWV ATFSLGILAR SEADSANPKL
IPVFWAPILL VHLGGPGTIP VYSMDQASKL LIGRLLQLVT RVGVACYVLF RLWNNNVITS
VFIPIFVSGI IKYGERISVL TRLHVYNNVS PRPCAEVHRI KIKDILPCYK NTRSNVIYLH
EAHILYKTFQ ILSKNFDLVR SDQKFTYDLV SKKEAEEAFH LTEVELGLKY DRFYSKVTRI
SRSRVILRST TFLSSISALV SFSIMTKSNG VYSKNDKIIS YVLLSGVVCL ETYSIIMQLF
SDWTMIWLTS TSERAGGIPR GINCLSLLLT FWRKRKRWWS GSMGQHNLIS AQSNKPVNKL
LKKYFPWIIG NIDSRKKVGK DLKELIFKQV KDKRSRYDPD SSDFTFLKNL LKERGREALQ
SKDCIGKFGW SVDGVEFIHS LLTWHIATHV CYLYDSDQKN GFHKKRKSVI LNSTLLSDYM
LYLLVNCPTM LAREPSETRY DDTRIHLRRL LFWNTHKEVK LNISLEELNA LSFQEAEVKA
FFKELLQSPS TVLKEIEEQG KGEMSALLDG CMLAVSLQSL ERRDGWSNDE KWEMISHVWV
DMVMYAASHC GWKQHTHALA RGGELLTHVC LLMAHLGLSK QCRPAISEQL ADRSTRLAGI
LESEKPSSLG PSFMSKDTTN GTKTNLDSIR SSCYLQIYKR SLSPFTIS
//
