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Database: UniProt
Entry: A0A3N7G0R3_POPTR
LinkDB: A0A3N7G0R3_POPTR
Original site: A0A3N7G0R3_POPTR 
ID   A0A3N7G0R3_POPTR        Unreviewed;      1585 AA.
AC   A0A3N7G0R3;
DT   13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   RecName: Full=C2H2-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=POPTR_015G089000 {ECO:0000313|EMBL:RQP00790.1};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS   trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:RQP00790.1, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:RQP00790.1, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA   Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA   Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA   Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA   Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA   Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA   Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA   Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA   Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA   Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA   Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA   Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA   Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA   Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA   Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA   Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
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DR   EMBL; CM009304; RQP00790.1; -; Genomic_DNA.
DR   Proteomes; UP000006729; Chromosome 15.
DR   GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR   GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR   GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR   Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR   Gene3D; 2.60.120.650; Cupin; 1.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR003349; JmjN.
DR   InterPro; IPR036236; Znf_C2H2_sf.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR   PANTHER; PTHR10694:SF38; LYSINE-SPECIFIC DEMETHYLASE REF6; 1.
DR   Pfam; PF02373; JmjC; 1.
DR   Pfam; PF02375; JmjN; 1.
DR   SMART; SM00558; JmjC; 1.
DR   SMART; SM00545; JmjN; 1.
DR   SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR   SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR   PROSITE; PS51184; JMJC; 1.
DR   PROSITE; PS51183; JMJN; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR   PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00042}; Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW   Zinc {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-ProRule:PRU00042};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00042}.
FT   DOMAIN          30..71
FT                   /note="JmjN"
FT                   /evidence="ECO:0000259|PROSITE:PS51183"
FT   DOMAIN          196..365
FT                   /note="JmjC"
FT                   /evidence="ECO:0000259|PROSITE:PS51184"
FT   DOMAIN          1552..1583
FT                   /note="C2H2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50157"
FT   REGION          710..751
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          997..1042
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1078..1233
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1301..1355
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1373..1529
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        724..751
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        997..1030
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1078..1100
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1138..1225
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1301..1350
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1441..1461
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1472..1529
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1585 AA;  179026 MW;  4DBD64229F18667F CRC64;
     MAAPSGLSLD PPQPPTTTEV CQWLKNLPLA PEYRPTLSEF QDPIAYIFKI EKEASQYGIC
     KIIPPVLPSA KKTTLSNLNR SLCARNGGSS APTFTTRQQQ IGFCPRKPRP VQKPVWQSGE
     TYTFQEFETK ARTFEKNYLK KFFKKGALSP LEIETLYWKA TLDKPFSVEY ANDMPGSAFS
     PRKKEGQGGV AGEGMSVGDT EWNMRGVSRA KGSLLRFMKE EIPGVTSPMV YVGMMFSWFA
     WHVEDHDLHS LNYMHMGAGK TWYGVPREAA VAFEEVVRVH GYGGEINPLV TFAVLGEKTT
     VMSPEVFISA GVPCCRLVQN AGEFVVTFPR AYHSGFSHGF NCGEAANIAT PEWLMVAKDA
     AIRRASINYP PMVSHFQLLY DLALEFCTRI PMNIIAKPRS SRLKDKQKGE GEMLVKEQFV
     KNMIQNNDLL HILGKGSSVV LLPRGSSDIS VCSKLRVGSQ LRDNPTLGLC SQKDVMKSSK
     SSGSGDILQD KNQEINQVKG IFSVKAKFAS LCERNRFSTL NGNECSQSMN IGTERGRSIH
     GDKLSDQRLF SCVTCGILSF DCLAIIQPKE AASRYLMSAD CSFFNDWAVG SGVTRDVFAV
     AGGIANISEQ NSSRWVEKNT AAGFYDVPVQ SPNYQIQMAD QGVEVASSSA KQLEASALGL
     LALNYGNSSD SEEDQVEADL SHHDEINMTN CPLENKYQCQ SSAFPSYKQK DYDAATGGLP
     QSPSRLDERD DVPLKANDMN PEHGDRRDDF KDKTDECSFG FPTGNLASIE SNSLDGRYRD
     PMSMSHVSLN CSPIVHDIEK TKFNRPIAPI ENPDMPFTQR SDKDSSCMHV FCLEHAVEIE
     QQLRQIGGVH ILLLCHPEYP RIEGEAKLVS EELGIDHLWN DITFRDAAKE DEERIQSALD
     SEEAIPGSGD WAVKLGINLF FSANLSRSPF YSKQMPYNSV IYNAFGLASS VSSTPKFKVY
     GRRSGKPKKV VAGKWCGKVW MSNQVHPFLV ISDHVDQDHE QEQERSFHAS ATPDEKLEKK
     PQTSNKTETT RKSGRKRKIT AGSRSIKKVK CLEAEEPDSE DSMGDNCHRQ RVRCRRKWAK
     SVESDDAVSD DPLAEHVRQQ YRRMRRSKQA KSIKRENTVS YASVENKFQK QLKRAHRSDR
     AKFFERRSAA SDNSLDDNSD QWHERAPRST QAKYTESEDA FSDDSPEESS RWLHGRVPKS
     KQLKYIDKEG VISDDSMESD SHQHNRRVSR GKRAQLIKRN DVVSDDSLDE SAYQRLPRFS
     RSKLAKLIER ENAVSDDSLD DNIHQHHGRV LKSKQAKFVE GEDAISDDSH EDNTDWQRKR
     IPRSKMAKFV ESEDAASDDL QEDDTHEHRR RIPKSKKMNF IEREVVISDD LWENNTHRHP
     RKAPRSKQAR FIEREDLVSD DLLEDNSDQQ QKRILRSKQK KSATLCQMKQ GTRKPKHIAP
     KMIKKETLKL IKQERQIKQE TPQQRIGKSE LNARQFDSHS EEGVEGGPST RLRKRPSKPP
     KQLETKLKEK QQNSRKKLKD ASAVKAPVGR KNVKIKDEEA EYIRVHTGER PYVCAEEGCG
     QTFRFVSDFS RHKRKTGHSA KKSRG
//
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