ID A0A3N7G0R3_POPTR Unreviewed; 1585 AA.
AC A0A3N7G0R3;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_015G089000 {ECO:0000313|EMBL:RQP00790.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:RQP00790.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:RQP00790.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009304; RQP00790.1; -; Genomic_DNA.
DR Proteomes; UP000006729; Chromosome 15.
DR GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF38; LYSINE-SPECIFIC DEMETHYLASE REF6; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}; Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Zinc {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 30..71
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 196..365
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT DOMAIN 1552..1583
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 710..751
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 997..1042
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1078..1233
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1301..1355
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1373..1529
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 724..751
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 997..1030
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1078..1100
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1138..1225
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1301..1350
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1441..1461
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1472..1529
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1585 AA; 179026 MW; 4DBD64229F18667F CRC64;
MAAPSGLSLD PPQPPTTTEV CQWLKNLPLA PEYRPTLSEF QDPIAYIFKI EKEASQYGIC
KIIPPVLPSA KKTTLSNLNR SLCARNGGSS APTFTTRQQQ IGFCPRKPRP VQKPVWQSGE
TYTFQEFETK ARTFEKNYLK KFFKKGALSP LEIETLYWKA TLDKPFSVEY ANDMPGSAFS
PRKKEGQGGV AGEGMSVGDT EWNMRGVSRA KGSLLRFMKE EIPGVTSPMV YVGMMFSWFA
WHVEDHDLHS LNYMHMGAGK TWYGVPREAA VAFEEVVRVH GYGGEINPLV TFAVLGEKTT
VMSPEVFISA GVPCCRLVQN AGEFVVTFPR AYHSGFSHGF NCGEAANIAT PEWLMVAKDA
AIRRASINYP PMVSHFQLLY DLALEFCTRI PMNIIAKPRS SRLKDKQKGE GEMLVKEQFV
KNMIQNNDLL HILGKGSSVV LLPRGSSDIS VCSKLRVGSQ LRDNPTLGLC SQKDVMKSSK
SSGSGDILQD KNQEINQVKG IFSVKAKFAS LCERNRFSTL NGNECSQSMN IGTERGRSIH
GDKLSDQRLF SCVTCGILSF DCLAIIQPKE AASRYLMSAD CSFFNDWAVG SGVTRDVFAV
AGGIANISEQ NSSRWVEKNT AAGFYDVPVQ SPNYQIQMAD QGVEVASSSA KQLEASALGL
LALNYGNSSD SEEDQVEADL SHHDEINMTN CPLENKYQCQ SSAFPSYKQK DYDAATGGLP
QSPSRLDERD DVPLKANDMN PEHGDRRDDF KDKTDECSFG FPTGNLASIE SNSLDGRYRD
PMSMSHVSLN CSPIVHDIEK TKFNRPIAPI ENPDMPFTQR SDKDSSCMHV FCLEHAVEIE
QQLRQIGGVH ILLLCHPEYP RIEGEAKLVS EELGIDHLWN DITFRDAAKE DEERIQSALD
SEEAIPGSGD WAVKLGINLF FSANLSRSPF YSKQMPYNSV IYNAFGLASS VSSTPKFKVY
GRRSGKPKKV VAGKWCGKVW MSNQVHPFLV ISDHVDQDHE QEQERSFHAS ATPDEKLEKK
PQTSNKTETT RKSGRKRKIT AGSRSIKKVK CLEAEEPDSE DSMGDNCHRQ RVRCRRKWAK
SVESDDAVSD DPLAEHVRQQ YRRMRRSKQA KSIKRENTVS YASVENKFQK QLKRAHRSDR
AKFFERRSAA SDNSLDDNSD QWHERAPRST QAKYTESEDA FSDDSPEESS RWLHGRVPKS
KQLKYIDKEG VISDDSMESD SHQHNRRVSR GKRAQLIKRN DVVSDDSLDE SAYQRLPRFS
RSKLAKLIER ENAVSDDSLD DNIHQHHGRV LKSKQAKFVE GEDAISDDSH EDNTDWQRKR
IPRSKMAKFV ESEDAASDDL QEDDTHEHRR RIPKSKKMNF IEREVVISDD LWENNTHRHP
RKAPRSKQAR FIEREDLVSD DLLEDNSDQQ QKRILRSKQK KSATLCQMKQ GTRKPKHIAP
KMIKKETLKL IKQERQIKQE TPQQRIGKSE LNARQFDSHS EEGVEGGPST RLRKRPSKPP
KQLETKLKEK QQNSRKKLKD ASAVKAPVGR KNVKIKDEEA EYIRVHTGER PYVCAEEGCG
QTFRFVSDFS RHKRKTGHSA KKSRG
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