ID A0A3N7HKS4_POPTR Unreviewed; 520 AA.
AC A0A3N7HKS4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 11.
DE RecName: Full=CTLH domain-containing protein {ECO:0000259|PROSITE:PS50897};
GN ORFNames=POPTR_014G194100 {ECO:0000313|EMBL:RQP00379.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:RQP00379.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:RQP00379.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009303; RQP00379.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N7HKS4; -.
DR STRING; 3694.A0A3N7HKS4; -.
DR InParanoid; A0A3N7HKS4; -.
DR OrthoDB; 5491841at2759; -.
DR Proteomes; UP000006729; Chromosome 14.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR006595; CTLH_C.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22838; WD REPEAT PROTEIN 26-RELATED; 1.
DR PANTHER; PTHR22838:SF23; WD REPEAT-CONTAINING PROTEIN WDS HOMOLOG; 1.
DR Pfam; PF00400; WD40; 4.
DR SMART; SM00668; CTLH; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50897; CTLH; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 48..105
FT /note="CTLH"
FT /evidence="ECO:0000259|PROSITE:PS50897"
FT REPEAT 218..251
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 263..304
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 478..520
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 520 AA; 58642 MW; BEA5BB95EED57428 CRC64;
MENSPTTIGS KGLIKQHEFV RVIIQSLYSL GYRKSGSCLE SESGVSYKSM NLELLESQIL
EGDWDGCINT LCAIQELADE TRASVLFLVF KQCLLEYLIG GDDTLALSVL RNQVPALRMG
KENVHNLAYS IICLKEMELS KADDNVIHGQ RKNLLTELGT LLPPPTVLPE RRLEHLVETA
ITAQIDSCDY HNSVEPISLY EDHNCSRDQF PTETIQTLTE HENEVWFVQF SNNGEYLASS
SSDCTAIIWK VLEDGRLSFK HMLRSHLTPV SFVAWSPDDT KLLTCGNVEV LKLWDVETGT
CKHTFGDHGF VVSSCAWFPD SKRFVCGSSD PEKGICMWDC DGNEIKAWRG TRMPKVLDLA
VTPDGENLIS VMSDLEIRIL NVRTNAEQVI PEEQPITSLS VSADSKFFIV NLNSQEIHLW
DVAGKWKKPL KYIGHQQHKY VIRSCFGGLD SSFIASGSEN SQQVYIWNRR NSRPIEVLSG
HLMTVNCVCW NPKRHQMLAS ASDDHTIRIW GPSRSKNIQR
//
