ID A0A3N7HVB3_9BURK Unreviewed; 822 AA.
AC A0A3N7HVB3;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Ligase-associated DNA damage response DEXH box helicase {ECO:0000313|EMBL:RQP26300.1};
GN ORFNames=DZC73_04535 {ECO:0000313|EMBL:RQP26300.1};
OS Albitalea terrae.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Albitalea.
OX NCBI_TaxID=2496871 {ECO:0000313|EMBL:RQP26300.1, ECO:0000313|Proteomes:UP000267464};
RN [1] {ECO:0000313|EMBL:RQP26300.1, ECO:0000313|Proteomes:UP000267464}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S-16 {ECO:0000313|EMBL:RQP26300.1,
RC ECO:0000313|Proteomes:UP000267464};
RA Khan S.A., Jeon C.O., Chun B.H., Jeong S.E.;
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:RQP26300.1, ECO:0000313|Proteomes:UP000267464}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S-16 {ECO:0000313|EMBL:RQP26300.1,
RC ECO:0000313|Proteomes:UP000267464};
RA Shunsuke S.S.;
RT "Rhizobacter gummiphilus sp. nov., a rubber-degrading bacterium isolated
RT from the soil of a botanical garden in Japan.";
RL Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RQP26300.1}.
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DR EMBL; QUSW01000001; RQP26300.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3N7HVB3; -.
DR OrthoDB; 9815222at2; -.
DR Proteomes; UP000267464; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18796; SF2_C_LHR; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR013701; DEAD/DEAH_assoc.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR026362; DEXH_lig_assoc.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR017170; Lhr-like_ATP-dep_RNA_helic_prd.
DR InterPro; IPR045628; Lhr_WH_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR04121; DEXH_lig_assoc; 1.
DR PANTHER; PTHR47962; ATP-DEPENDENT HELICASE LHR-RELATED-RELATED; 1.
DR PANTHER; PTHR47962:SF3; LARGE ATP-DEPENDENT HELICASE-RELATED PROTEIN; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08494; DEAD_assoc; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF19306; Lhr_WH; 1.
DR PIRSF; PIRSF037307; Lhr-like_helic_prd; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Ligase {ECO:0000313|EMBL:RQP26300.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000267464}.
FT DOMAIN 34..219
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 250..403
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 822 AA; 91000 MW; 77E33A7579D5BB9E CRC64;
MSATRRRQAA EHEAIESWFQ SQGWAPFDFQ RDVWRAMASG RSGLLHATTG SGKTYAVWMG
ALLHAMRQGV PMQGRTAPAL SVLWITPMRA LAADTTRALT LPLPQLAPAW TIGMRSGDTS
SAERQRQDRR MPTALVTTPE SLSLMLSRET ARDELAGVQA VVVDEWHELM GNKRGVQVQL
ALARLKRWNP RLIVWGLSAT LGNLADAMHV LLGHEDGALV QGRVDKTLVI DTLIPAEPGR
FSWGGHLGAQ MQKPVVEEIA RSSTTLVFVN VRSQAEIWYQ LLLQERPDWA GSVALHHGSL
DQETREWVEQ GLKAGELKAV VATSSLDLGV DFLPVERVLQ IGSPKGIARL LQRAGRSGHA
PGRPSRVTIV PTNTLELIEA VAARRAARAG CIEKRATPEK PLDVLVQHLV TVALGGGFTP
DELFDEVRTA RAYRHLTRDE FQWALDFVEK GGASLAAYPE YHRVQLVDGL YRVPDRAIAR
RHKLQIGTIV SDSSMQVKYL SGGRIGVVEE GFISRLKPGD CFVFAGRTLE YVRTREMTAY
VKKAERPRGL ITTWAGAKMP LSSELAEASL EVMADVERGH ADEPELRAAQ PMLDTQMRLS
KLPTPSTLLI EQFDSREGHH VFLYPFAGRY VHIGLASLLA WRLAKEAPNT FSLSINDYGL
EMLSAQPVDL APLLDKRAFD EGDLLHDVLA SLNSSELARR RFREIARVAG LIFTGYPGAP
KSTRQLQASS SLFYEVFSKY DAGNLLLSQA QGEVLSQELD IRRLAASLAR MRSQRVEAVN
LAAPSPFALP LMVERFREKL TTEKLKDRLA RIIRDAEKAA QP
//
