ID A0A3P8P6Q0_ASTCA Unreviewed; 1074 AA.
AC A0A3P8P6Q0;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=RAD50 homolog, double strand break repair protein {ECO:0000313|Ensembl:ENSACLP00000012686.1};
GN Name=RAD50 {ECO:0000313|Ensembl:ENSACLP00000012686.1};
OS Astatotilapia calliptera (Eastern happy) (Chromis callipterus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Haplochromini; Astatotilapia.
OX NCBI_TaxID=8154 {ECO:0000313|Ensembl:ENSACLP00000012686.1, ECO:0000313|Proteomes:UP000265100};
RN [1] {ECO:0000313|Ensembl:ENSACLP00000012686.1, ECO:0000313|Proteomes:UP000265100}
RP NUCLEOTIDE SEQUENCE.
RA Datahose.;
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSACLP00000012686.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: Belongs to the SMC family. RAD50 subfamily.
CC {ECO:0000256|ARBA:ARBA00009439}.
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DR AlphaFoldDB; A0A3P8P6Q0; -.
DR STRING; 8154.ENSACLP00000012686; -.
DR Ensembl; ENSACLT00000012998.1; ENSACLP00000012686.1; ENSACLG00000008504.1.
DR GeneTree; ENSGT00390000018781; -.
DR OMA; NIIFCHQ; -.
DR Proteomes; UP000265100; Chromosome 23.
DR Bgee; ENSACLG00000008504; Expressed in ovary and 1 other cell type or tissue.
DR GO; GO:0030870; C:Mre11 complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0051321; P:meiotic cell cycle; IEA:UniProtKB-KW.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR004584; Rad50_eukaryotes.
DR InterPro; IPR013134; Zn_hook_RAD50.
DR NCBIfam; TIGR00606; rad50; 1.
DR PANTHER; PTHR18867:SF12; DNA REPAIR PROTEIN RAD50; 1.
DR PANTHER; PTHR18867; RAD50; 1.
DR Pfam; PF04423; Rad50_zn_hook; 1.
DR Pfam; PF13558; SbcC_Walker_B; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF75712; Rad50 coiled-coil Zn hook; 1.
DR PROSITE; PS51131; ZN_HOOK; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Meiosis {ECO:0000256|ARBA:ARBA00023254};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00471}; Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00471}.
FT DOMAIN 560..659
FT /note="Zinc-hook"
FT /evidence="ECO:0000259|PROSITE:PS51131"
FT COILED 145..274
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 328..452
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 637..706
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 766..793
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 835..863
FT /evidence="ECO:0000256|SAM:Coils"
FT BINDING 606
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00471"
FT BINDING 609
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00471"
SQ SEQUENCE 1074 AA; 126116 MW; C6A04787F637BAD5 CRC64;
MLQDAQRTVV RAQIELSLSD IKGEEIEIQR FVSCSLIENK YSFKSEEQNI KRTKDGRRVS
RSVKCGDLHQ EITSALGVSK SVLNDVIFCH QEESNWPLSE DRVLKEKFDS IFNVTKYNKA
RSKMHELRLK QSRRVEQCQA ELFYLEKNKE KAQHLRDNVA QKQADLRASQ NLILHIENQI
DPLETLLSDI KMKLENVTKL ENETKALDSL RKQMEEHNKE LEETMEEVFQ GSDEQLQHTY
DNHQRTVMEK EQKLQQHQEE LQTFDQEYQR LTRETNDLLY TMTLLFIHMS SVSQVHSLSS
CLEMEGYDQL PFTVSQLESF YHQVTHRLEQ ENERVSQLLV RRAELQKLEQ QKQQSVDEMR
DRKTYMERTV EMKRDERQKK QQELKNITEE LQRLQDSCSR LQELENKLAE VEREDAVQSS
SVEELKAEVE ELQEEKAELD CTQRQLDKEM ETLNMHTAAL TQMDILKKGK AEMEEQILQI
RSRHCEDLVS LLGHFPNKKE LEDWVSSKSK EIGSTRDRLT KLKMDLASNE QNKSHITAEL
LKKELQLATD EEKFLNVCSS RDLEHDLSNL QRELDEIFKT KALLAGTKVV YTQFISELSE
HREPCCPVCR RSFPSESEVQ EVVRVLQSKL HLVPEKLKIT EQDLERTERR REEIVALRPV
RYSVRDFQEN ELPALRKRLQ TVDREAERLK GDVEEQEALL AILRSEEEKA KDCLQGISLM
DSYLVESKID QQASKLQEVN LDNTFQQLSQ DKHETQDQLD TTYSTIVRKH KQIQDQQEQI
QRLKSAAIEM RDEQLQLIRD KQKQQHLEEL SAEIAARMEA LTTEIREGNE ELCPLSAALE
KLQQEKQKLV EQKKQREEEE QKKVDAYIKF TAGRRLIISV GQKPCEGHQS LFLCCFHRAI
VKFHSMKMDE INQNIRDLWR STYRGQDIEY IEIRSEVEER SERRRSYNYR VVMMRGDADV
NMRGRCSAGQ KVLASLIIRL ALAEAFCLDC GILALDEPTT NLDRENIESL ADALVEIIRT
RSQQRHFQLL IITHDEDFVQ LLVRSGCIQH FYRISKNQDQ NSKITKQSTA FLSV
//