ID A0A3P8SS38_AMPPE Unreviewed; 805 AA.
AC A0A3P8SS38;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=RNA exonuclease 5 {ECO:0000313|Ensembl:ENSAPEP00000014917.1};
GN Name=REXO5 {ECO:0000313|Ensembl:ENSAPEP00000014917.1};
OS Amphiprion percula (Orange clownfish) (Lutjanus percula).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Pomacentridae; Amphiprion.
OX NCBI_TaxID=161767 {ECO:0000313|Ensembl:ENSAPEP00000014917.1, ECO:0000313|Proteomes:UP000265080};
RN [1] {ECO:0000313|Ensembl:ENSAPEP00000014917.1, ECO:0000313|Proteomes:UP000265080}
RP NUCLEOTIDE SEQUENCE.
RA Lehmann R.;
RT "Finding Nemo's genes: A chromosome-scale reference assembly of the genome
RT of the orange clownfish Amphiprion percula.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSAPEP00000014917.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3P8SS38; -.
DR STRING; 161767.ENSAPEP00000014917; -.
DR Ensembl; ENSAPET00000015307.1; ENSAPEP00000014917.1; ENSAPEG00000010627.1.
DR GeneTree; ENSGT00940000161162; -.
DR Proteomes; UP000265080; Chromosome 3.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd06145; REX1_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034922; REX1-like_exo.
DR InterPro; IPR047021; REXO1/3/4-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR12801:SF115; RNA EXONUCLEASE 5; 1.
DR PANTHER; PTHR12801; RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED; 1.
DR Pfam; PF00929; RNase_T; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Nuclease {ECO:0000256|ARBA:ARBA00022839};
KW Reference proteome {ECO:0000313|Proteomes:UP000265080};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 500..574
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..43
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 805 AA; 89640 MW; 6817AD1E4E921971 CRC64;
MESSSSLSSS PSLCNTKKRK NTAVGAHEKA KTLKTEQEGD EALQSGRLSR SPRVSVPLDC
LQQPITLNKL TELLHYAALG RTGGIKQPSW CRLRHQRKVE GLNVVIVEGL TQSHFYKHYL
SLRQLRTKYT TRVTFTPSCN NVASGIFSSE LPKMDCVYFS KPDNDLHSAL KGHPVIAKFG
TQRRGLTAYV LTQEEMIKKH YPVKGMPGFE EFVSTDSVDC VTDSSPLYGL DCEMCLTEKG
HELTRVSVVD SDGNCVLDDL VKPKNRILNY LTKFSGITAA MLQPITTTLR DVQEKLRMLL
PGDAVLVGHS INNDLIALKL IHQHVIDTSL LYRREFGQRF KLKVLAETVL KRQIQTEEKK
GHNPSEDAAA ALELAQYFIK TGPRQVVERH LEELWGYTIE EEESSDCKSA PTPSLRFADI
LQLLGRSVAF LGKRSDVALN LSNQQWYSSD KEVLESFKRQ TKHPFLSVVQ FSSFSNHLKR
RVLHQEQLHR SLCANLRDMC VVFAGPFPAG FSERQVRRLF HCCGPVGRIK MLHTSVRVHA
EVEFELLEGA TLALKTLNGL NVQGQPMKVQ RPMNESMLDL DLTLDALTGD TLNTSHLYAI
KLNPSVAECI KSSAKVNGHT LDSKCSGVSP VNGLPAAKTN LLQLTDTRST LSEETVTETF
GHFGTVERVI LPAKPGKHTR HACIKFESSE GKHAALSSSK YLRQENYLIC QSLTPPHLPS
WVAMATPVTT IRGDGEAAED ENTANMYHSS QDLEMDHMMK KLDSRLGKLF RSLPDSTLSV
VVLLGHTSVN GHFPGLCLME VKQGS
//