ID A0A3P8VZU7_CYNSE Unreviewed; 334 AA.
AC A0A3P8VZU7;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=LIM domain-containing protein {ECO:0000256|PIRNR:PIRNR038003};
OS Cynoglossus semilaevis (Tongue sole).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae;
OC Cynoglossinae; Cynoglossus.
OX NCBI_TaxID=244447 {ECO:0000313|Ensembl:ENSCSEP00000020788.1, ECO:0000313|Proteomes:UP000265120};
RN [1] {ECO:0000313|Ensembl:ENSCSEP00000020788.1, ECO:0000313|Proteomes:UP000265120}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=24487278;
RA Chen S., Zhang G., Shao C., Huang Q., Liu G., Zhang P., Song W., An N.,
RA Chalopin D., Volff J.N., Hong Y., Li Q., Sha Z., Zhou H., Xie M., Yu Q.,
RA Liu Y., Xiang H., Wang N., Wu K., Yang C., Zhou Q., Liao X., Yang L.,
RA Hu Q., Zhang J., Meng L., Jin L., Tian Y., Lian J., Yang J., Miao G.,
RA Liu S., Liang Z., Yan F., Li Y., Sun B., Zhang H., Zhang J., Zhu Y., Du M.,
RA Zhao Y., Schartl M., Tang Q., Wang J.;
RT "Whole-genome sequence of a flatfish provides insights into ZW sex
RT chromosome evolution and adaptation to a benthic lifestyle.";
RL Nat. Genet. 46:253-260(2014).
RN [2] {ECO:0000313|Ensembl:ENSCSEP00000020788.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3P8VZU7; -.
DR Ensembl; ENSCSET00000021055.1; ENSCSEP00000020788.1; ENSCSEG00000013230.1.
DR GeneTree; ENSGT00940000153518; -.
DR OMA; CHEPLGD; -.
DR Proteomes; UP000265120; Chromosome 16.
DR GO; GO:0005925; C:focal adhesion; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09331; LIM1_PINCH; 1.
DR CDD; cd09332; LIM2_PINCH; 1.
DR CDD; cd09333; LIM3_PINCH; 1.
DR CDD; cd09334; LIM4_PINCH; 1.
DR CDD; cd09335; LIM5_PINCH; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 5.
DR InterPro; IPR047944; LIMS1/2-like_LIM1.
DR InterPro; IPR047946; PINCH-1/2-like.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR24210; LIM DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24210:SF0; LIM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00412; LIM; 5.
DR PIRSF; PIRSF038003; PINCH; 1.
DR SMART; SM00132; LIM; 5.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 6.
DR PROSITE; PS00478; LIM_DOMAIN_1; 2.
DR PROSITE; PS50023; LIM_DOMAIN_2; 4.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PIRNR:PIRNR038003};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000265120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 17..78
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 80..137
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 200..259
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 260..319
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
SQ SEQUENCE 334 AA; 38099 MW; 020741B51EE9054E CRC64;
LTGNGVGCNM ANALANAMCE RCKSGFAPAE KIVNSNGELY HEQCFVCAQC FQQFPEGLFY
EFEGRKYCEH DFQMLFAPCC HQCGEFIIGR VIKAMNNSWH PDCFCCDICQ AVLADVGFVK
NAGRHLCRPC HNREKARGLG KYICQKCHAI IEEHPLLFKN DPYHPDHFNC NNCGKELTAD
ARELKGELYC LPCHDKMGVP ICGACRRPIE GRVVNAMGKQ WHVEHFVCAK CEKPFLGHRH
YERKGLAYCE THYNQLFGDV CYHCNRVIEG DVVSALNKAW CVNCFACSTC NSKLTLKNKF
VEFDMKPVCK KCYEKFPLEL KKRLKKLSET VARK
//
