ID A0A3P8YFP5_ESOLU Unreviewed; 695 AA.
AC A0A3P8YFP5;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 02-DEC-2020, sequence version 2.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=DNA-binding protein RFX2 {ECO:0000256|ARBA:ARBA00039910};
DE AltName: Full=Regulatory factor X 2 {ECO:0000256|ARBA:ARBA00042136};
OS Esox lucius (Northern pike).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes;
OC Esocidae; Esox.
OX NCBI_TaxID=8010 {ECO:0000313|Ensembl:ENSELUP00000014720.2, ECO:0000313|Proteomes:UP000265140};
RN [1] {ECO:0000313|Ensembl:ENSELUP00000014720.2, ECO:0000313|Proteomes:UP000265140}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=25069045;
RA Rondeau E.B., Minkley D.R., Leong J.S., Messmer A.M., Jantzen J.R.,
RA von Schalburg K.R., Lemon C., Bird N.H., Koop B.F.;
RT "The genome and linkage map of the northern pike (Esox lucius): conserved
RT synteny revealed between the salmonid sister group and the Neoteleostei.";
RL PLoS ONE 9:e102089-e102089(2014).
RN [2] {ECO:0000313|Ensembl:ENSELUP00000014720.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A3P8YFP5; -.
DR STRING; 8010.ENSELUP00000014720; -.
DR Ensembl; ENSELUT00000023619.2; ENSELUP00000014720.2; ENSELUG00000014877.2.
DR GeneTree; ENSGT01050000244879; -.
DR Proteomes; UP000265140; LG08.
DR Bgee; ENSELUG00000014877; Expressed in nose and 15 other cell types or tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR003150; DNA-bd_RFX.
DR InterPro; IPR039779; RFX-like.
DR InterPro; IPR007668; RFX1_trans_act.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12619:SF17; DNA-BINDING PROTEIN RFX2; 1.
DR PANTHER; PTHR12619; RFX TRANSCRIPTION FACTOR FAMILY; 1.
DR Pfam; PF04589; RFX1_trans_act; 1.
DR Pfam; PF02257; RFX_DNA_binding; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51526; RFX_DBD; 1.
PE 4: Predicted;
KW Cilium biogenesis/degradation {ECO:0000256|ARBA:ARBA00022794};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000265140}.
FT DOMAIN 177..252
FT /note="RFX-type winged-helix"
FT /evidence="ECO:0000259|PROSITE:PS51526"
FT REGION 1..29
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 286..312
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..312
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 695 AA; 77333 MW; 45B9E24B8442FD1A CRC64;
MQSSEGGSDS SSSVALRTST SAQAPVVQPV PASQQVQQIQ HVYPSQVQYV GEGGEAVYAN
GTIRTAYSYS PDAQLYGQGS GATYFDSQSG GAQVTTVVSS ASGMPSHGMV GIAMDVGGSQ
IISSGSTYLI HGGGMEGGRH HTSHSSRSSS AMLEMAIENL QKSEGIATHK SSLLNSHLQW
LLDNYETAEG VSLPRSSLYN HYLRHCQEQK LDPVNAASFG KLIRSVFMGL RTRRLGTRGN
SKYHYYGIRL KPDSPLNRLQ EDSQYMAMRQ QPVHQKQRFK PLQKVDGMGE SLSGGSQHSA
STPEQSVAAQ SQHHQQYIDV SHVLPPFPSP DLGTQPLPER INMNDVKKLQ SLYRDHCEAT
LDVVMNLQFH YIEKLWQTFW YSTAPSSDGT TTIPNSDEDM EGVIPREKLI ALCKYEPVKL
WMRSCDHILY QALVEILIPD VLRPVPSTLT QAIRNFAKSL EGWLTTAMSD FPNEIVRTKA
AVVSAFAQTL RRYTSLNHLA QAARAVLQNT SQINQMLSDL NRVDFANVQE QASWVCQCDE
SVVQRLEQDF KVTLQQQSSL DQWAAWLDNV VNQVLKSHEG SPSFPKAARQ FLLKWSFYSS
MVIRDLTLRS AASFGSFHLI RLLYDEYMFY LVEHRVAQAT GETPIAVMGE FSDLNSMMLM
DKDDMSDMGS DEGRGPNEPA VKRERIEINH SLQEI
//