ID A0A3P8YGZ9_ESOLU Unreviewed; 967 AA.
AC A0A3P8YGZ9;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Cold shock domain containing E1, RNA-binding {ECO:0000313|Ensembl:ENSELUP00000015386.1};
OS Esox lucius (Northern pike).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Esociformes;
OC Esocidae; Esox.
OX NCBI_TaxID=8010 {ECO:0000313|Ensembl:ENSELUP00000015386.1, ECO:0000313|Proteomes:UP000265140};
RN [1] {ECO:0000313|Ensembl:ENSELUP00000015386.1, ECO:0000313|Proteomes:UP000265140}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=25069045;
RA Rondeau E.B., Minkley D.R., Leong J.S., Messmer A.M., Jantzen J.R.,
RA von Schalburg K.R., Lemon C., Bird N.H., Koop B.F.;
RT "The genome and linkage map of the northern pike (Esox lucius): conserved
RT synteny revealed between the salmonid sister group and the Neoteleostei.";
RL PLoS ONE 9:e102089-e102089(2014).
RN [2] {ECO:0000313|Ensembl:ENSELUP00000015386.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3P8YGZ9; -.
DR STRING; 8010.ENSELUP00000015386; -.
DR Ensembl; ENSELUT00000024441.2; ENSELUP00000015386.1; ENSELUG00000015507.2.
DR GeneTree; ENSGT00390000016950; -.
DR InParanoid; A0A3P8YGZ9; -.
DR OMA; PPIMNSD; -.
DR Proteomes; UP000265140; LG12.
DR Bgee; ENSELUG00000015507; Expressed in bone element and 15 other cell types or tissues.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR024642; SUZ-C.
DR PANTHER; PTHR12913:SF2; COLD SHOCK DOMAIN-CONTAINING PROTEIN E1 ISOFORM X1; 1.
DR PANTHER; PTHR12913; UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN; 1.
DR Pfam; PF00313; CSD; 5.
DR Pfam; PF12901; SUZ-C; 1.
DR SMART; SM00357; CSP; 5.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 5.
DR PROSITE; PS00352; CSD_1; 4.
DR PROSITE; PS51857; CSD_2; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000265140}.
FT DOMAIN 122..186
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 299..361
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 463..527
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 645..708
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 807..871
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 555..574
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 908..929
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 909..923
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 967 AA; 106848 MW; B017C5713C825E2D CRC64;
MGSPWKGFVE FTLPASPPAA FVSADLSSSS PVGLSLSPYG RSCLPVLSPL LDMERIHSEP
PLAHKTASAS STSAVTIPRS FSVSHKKHKR TPLYQRSMSF DPGMLHNNGH TAFANGTVAG
IRETGVVEKL LTSYGFIQCS ERQARLFFHC SQYNGNLQEL KIGDDVEFEV SSDRRTGKPI
AVKLLKIKPE VLPEERISGQ VGPDSHASPF TVLHGYIHPV VSAISTHLDS KSTLGQVPTG
SVCYERNGEV FYLTYTPDDI EGNMHLDTGD KVSFYMETNK HTGAVSAHNI VLVKKKQMRC
QGVVCATKEA FGFIERADVV KEIFFHYSEF KGDLEALQAG DDVEFTIKER NGKEVATDVR
LLPQGTVIFE DISIEQFEGT VAKVIPKVPT KNQNDPLPGR ICARISFTDK ELLFGEKDTK
SKVTLLEGDH VQFNISTDRR DKLERATNID ILPDTFHFTK ESREMGVIAA MRDGFGFIKC
VDRDARMFFH FSEVLEESQL HISDEVEFTV VPDMLSAQRN HAVRIKKLPK GTVSFHTQSE
QRFVGLVEKE STAAVTNNKS ASPSKAKEKK KDKGKVVEKE AEEGVISYED CGVKLTVSYH
VKDLDGAAQP QAGDKVEFSI NEVKRTGQQS AVTIKILNRT VNTKRLLGYI ATLKDNFGFI
ETANHDQEIF FHYSELCGDL ENLELGDTVE YTLSKGKGNK VSAEKVTKVA AGRQESTPGN
GVGQDVGEAV MLGKVLRPLR SVDPSQTEYQ GLIELTEEDG TKGQHYPFGI VGMANKADCL
QKGEMVKFQL CTVSQTGQKM ACNVIPQRKA LVECVKDQFG FITYEVGESK KLFFHVKEVQ
DGLELQTGDE VEFSVILNQR TGKCSACNVR RVRCVSIVSI PFVINICDIA AQLSEKLSAG
TQLHVPEPRL VLSPPPHSEG PKPVATPRPD RLVNRLKSIT LDDVSAPRLV IVRQPRGPDN
SKVHLWM
//