ID A0A3P9D4I5_9CICH Unreviewed; 851 AA.
AC A0A3P9D4I5;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Cold shock domain containing E1 {ECO:0000313|Ensembl:ENSMZEP00005029117.1};
OS Maylandia zebra (zebra mbuna).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex.
OX NCBI_TaxID=106582 {ECO:0000313|Ensembl:ENSMZEP00005029117.1, ECO:0000313|Proteomes:UP000265160};
RN [1] {ECO:0000313|Ensembl:ENSMZEP00005029117.1, ECO:0000313|Proteomes:UP000265160}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=25186727; DOI=10.1038/nature13726;
RA Brawand D., Wagner C.E., Li Y.I., Malinsky M., Keller I., Fan S.,
RA Simakov O., Ng A.Y., Lim Z.W., Bezault E., Turner-Maier J., Johnson J.,
RA Alcazar R., Noh H.J., Russell P., Aken B., Alfoldi J., Amemiya C.,
RA Azzouzi N., Baroiller J.F., Barloy-Hubler F., Berlin A., Bloomquist R.,
RA Carleton K.L., Conte M.A., D'Cotta H., Eshel O., Gaffney L., Galibert F.,
RA Gante H.F., Gnerre S., Greuter L., Guyon R., Haddad N.S., Haerty W.,
RA Harris R.M., Hofmann H.A., Hourlier T., Hulata G., Jaffe D.B., Lara M.,
RA Lee A.P., MacCallum I., Mwaiko S., Nikaido M., Nishihara H.,
RA Ozouf-Costaz C., Penman D.J., Przybylski D., Rakotomanga M., Renn S.C.P.,
RA Ribeiro F.J., Ron M., Salzburger W., Sanchez-Pulido L., Santos M.E.,
RA Searle S., Sharpe T., Swofford R., Tan F.J., Williams L., Young S., Yin S.,
RA Okada N., Kocher T.D., Miska E.A., Lander E.S., Venkatesh B., Fernald R.D.,
RA Meyer A., Ponting C.P., Streelman J.T., Lindblad-Toh K., Seehausen O.,
RA Di Palma F.;
RT "The genomic substrate for adaptive radiation in African cichlid fish.";
RL Nature 513:375-381(2014).
RN [2] {ECO:0000313|Ensembl:ENSMZEP00005029117.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR RefSeq; XP_004572809.1; XM_004572752.3.
DR AlphaFoldDB; A0A3P9D4I5; -.
DR Ensembl; ENSMZET00005030035.1; ENSMZEP00005029117.1; ENSMZEG00005021675.1.
DR GeneID; 101466231; -.
DR CTD; 7812; -.
DR GeneTree; ENSGT00390000016950; -.
DR OrthoDB; 56539at2759; -.
DR Proteomes; UP000265160; LG20.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 7.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR024642; SUZ-C.
DR PANTHER; PTHR12913:SF2; COLD SHOCK DOMAIN-CONTAINING PROTEIN E1 ISOFORM X1; 1.
DR PANTHER; PTHR12913; UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN; 1.
DR Pfam; PF00313; CSD; 5.
DR Pfam; PF12901; SUZ-C; 1.
DR SMART; SM00357; CSP; 5.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 5.
DR PROSITE; PS00352; CSD_1; 4.
DR PROSITE; PS51857; CSD_2; 5.
DR PROSITE; PS51938; SUZ_C; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000265160}.
FT DOMAIN 78..142
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 236..298
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 400..464
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 571..634
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 726..790
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 801..842
FT /note="SUZ-C"
FT /evidence="ECO:0000259|PROSITE:PS51938"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 828..851
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..37
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 851 AA; 94218 MW; 28C0A8563349BF56 CRC64;
MERGSSEPPV ARNTGSTPSA STGPVPIPRS SSVSCHPHPG SKKHKRTPLY QRSMSFDPGM
LHNNGHTAYA NGSGPGIRET GVVEKLLTSY GFIQCSERQA RLFFHCSQYN GNLQELKIGD
DVEFEVSSDR RTGKPIAVKL LKIKPEVLPE ERISGQVVSS IPLHLDGKSA PGQVPTGSVC
YERNGEVFYL TYTPDDVEGN IHLDTGDKVS FYMETNKHTG AVSARNIQLV KKKQMRCQGV
VCATKEAFGF IERADVVKEI FFHYSEFKGD LEALQAGDDV EFTIKDRNGK EVATDVRLLP
QGTVIFEDIS IEQFEGTVVK VIPKVPTKNQ NDPLPGRVSV RMGFNDKELP FGEKDTKTKV
TLLEGDHIQF NISTDRRDKL ERATNIEILP DTFKFTKENR EMGVIAAIRD GFGFIKCVDR
DARMFFHFSE VLEEGQLHIS DEVEFTVVPD MLSAQRNHAV RIKKLPKGTV SFHIQSEQRF
VGVVEKEVVG NTAKNISPTK GKEKESEEGV IAYEDCGVKL TVPYHAKDLE GGSHPQVGDK
VEFSINEVKR TGQQSAVSIR VLNRNASGAK RLHGFVAALK DNFGFIETAN HDQEVFFHYS
EMCGDLDNLD LGDTVEYNLS KGKGNKVSAE KVTKVAAVNG IGEDVGGTVM TGKVIRPIRS
VDPSQTEYQG LVEFSEEGGS KVQNYPFGIM SMANKSDCLQ KGEQVKFQVC TITQTGQKMA
CNVVPQRRAM VECVKDQFGF ITYEVGDSKK LFFHVKEVQD GLELQTGDEV EFSVVLNQRT
GKCSACNVRR VSEGPKPVAT PRPDRLVNRL KSITLDDASA PRLVIVRQPR GPDNSKGFNV
ERKTRQPGVI D
//
