ID A0A3P9MWB4_POERE Unreviewed; 915 AA.
AC A0A3P9MWB4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=MHC class II regulatory factor RFX1-like {ECO:0000313|Ensembl:ENSPREP00000001637.1};
OS Poecilia reticulata (Guppy) (Acanthophacelus reticulatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Poecilia.
OX NCBI_TaxID=8081 {ECO:0000313|Ensembl:ENSPREP00000001637.1, ECO:0000313|Proteomes:UP000242638};
RN [1] {ECO:0000313|Proteomes:UP000242638}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Guanapo {ECO:0000313|Proteomes:UP000242638};
RA Kuenstner A., Dreyer C.;
RT "The genomic landscape of the Guanapo guppy.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSPREP00000001637.1}
RP IDENTIFICATION.
RC STRAIN=Guanapo {ECO:0000313|Ensembl:ENSPREP00000001637.1};
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A3P9MWB4; -.
DR STRING; 8081.ENSPREP00000001637; -.
DR Ensembl; ENSPRET00000001679.1; ENSPREP00000001637.1; ENSPREG00000001226.1.
DR GeneTree; ENSGT01050000244879; -.
DR OMA; CCLEDER; -.
DR Proteomes; UP000242638; Unassembled WGS sequence.
DR Bgee; ENSPREG00000001226; Expressed in head and 1 other cell type or tissue.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR003150; DNA-bd_RFX.
DR InterPro; IPR039779; RFX-like.
DR InterPro; IPR007668; RFX1_trans_act.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12619:SF23; MHC CLASS II REGULATORY FACTOR RFX1; 1.
DR PANTHER; PTHR12619; RFX TRANSCRIPTION FACTOR FAMILY; 1.
DR Pfam; PF04589; RFX1_trans_act; 1.
DR Pfam; PF02257; RFX_DNA_binding; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51526; RFX_DBD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000242638};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 372..447
FT /note="RFX-type winged-helix"
FT /evidence="ECO:0000259|PROSITE:PS51526"
FT REGION 1..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 344..363
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 484..504
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 854..915
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..56
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 487..504
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 861..878
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 915 AA; 99941 MW; 5A34A07E14BEFB72 CRC64;
MATSAYVGEM QPAAQPQGTA VTVTPGQTTP TEQVSVVASQ KPAAGSQSQT ASQVQPAQTQ
YVTAEIQGSP TQSGNAQSTP QYIVVTVTEG SLHSSDSVSD SSPPPAVVQT GVPTQVVQQV
QAAQQRSVVQ ATSQIAKTEP GPQLSVTNLQ PVHITQELPV SMEAVELGRD RTVDELQLHH
LTADPESLAW VPKVHNDNSG LWTVYYQVQQ QLASVPVQHV YANQVQYVEG GDTNYTTSTI
RSSTFPYTET PLYTQSTAAQ YYEGQPTSGT QASSPGTSLT VAVTAGATGG VSMFVAQPTT
AAGGGATVVA AGGTANGSEE GAGTNGSAVG SYVIQGGYML GSGSNSSSSS SNGGAAGNSQ
NYSHSARASP ATVQWLLDNY ETAEGVSLPR STLYCHYLLH CQEQKLEPVN AASFGKLIRS
VFMGLRTRRL GTRGNSKYHY YGLRIKAGSS LLRLMEDQQH LAMRQQPFSQ KQRLKPVHKV
EGMTNGTAAG AGQQQQQQQG SGHVDISTQV QQYQQFLDAS RSLPEFPDIE LHGKSLPEGI
ELDHIKSFQL LYREHCEAIL DVMVNLQFTL VETLWKTFWR FSQSQAGDTP MAVHDESEKR
LPKSCLVLLC KYEPVLRWSR DCDNSLYQSL VEILIPDVLR PIPSALTQAI RNFAKSLESW
LTNAMMNIPE EMVRIKVTSA NAFAQTLRRY TSLNHLAQAA RAVLQNTAQI NQMLSDLNRV
DFANVQEQAS WVCRCEDRVV QRLEQDFKLT LQQQNSLEQW AVWLDGVVSQ VLKPYQHSPA
FPKAAKLFLL KWSFYSSMVI RDLTLRSAAS FGSFHLIRLL YDEYMYYLIE HRVAQAKGET
PIAVMGEFAS LGRGLNQLDP DKEEEEEEDD ESEEEGQELT LPADAAVLGE ESLEPPAKLA
RTDQRVLFTT GSADN
//