ID A0A3P9NYQ4_POERE Unreviewed; 627 AA.
AC A0A3P9NYQ4;
DT 13-FEB-2019, integrated into UniProtKB/TrEMBL.
DT 13-FEB-2019, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=RNA polymerase II elongation factor ELL-like {ECO:0000313|Ensembl:ENSPREP00000014702.1};
OS Poecilia reticulata (Guppy) (Acanthophacelus reticulatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Poecilia.
OX NCBI_TaxID=8081 {ECO:0000313|Ensembl:ENSPREP00000014702.1, ECO:0000313|Proteomes:UP000242638};
RN [1] {ECO:0000313|Proteomes:UP000242638}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Guanapo {ECO:0000313|Proteomes:UP000242638};
RA Kuenstner A., Dreyer C.;
RT "The genomic landscape of the Guanapo guppy.";
RL Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSPREP00000014702.1}
RP IDENTIFICATION.
RC STRAIN=Guanapo {ECO:0000313|Ensembl:ENSPREP00000014702.1};
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the ELL/occludin family.
CC {ECO:0000256|ARBA:ARBA00009171, ECO:0000256|PROSITE-ProRule:PRU01324}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_008397530.1; XM_008399308.2.
DR AlphaFoldDB; A0A3P9NYQ4; -.
DR STRING; 8081.ENSPREP00000014702; -.
DR Ensembl; ENSPRET00000014853.1; ENSPREP00000014702.1; ENSPREG00000009938.1.
DR GeneID; 103458470; -.
DR KEGG; pret:103458470; -.
DR GeneTree; ENSGT00940000155914; -.
DR OMA; EAIEMRY; -.
DR OrthoDB; 2910197at2759; -.
DR Proteomes; UP000242638; Unassembled WGS sequence.
DR Bgee; ENSPREG00000009938; Expressed in caudal fin and 1 other cell type or tissue.
DR GO; GO:0008023; C:transcription elongation factor complex; IEA:InterPro.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR Gene3D; 6.10.140.340; -; 1.
DR Gene3D; 1.10.10.2670; E3 ubiquitin-protein ligase; 1.
DR InterPro; IPR042065; E3_ELL-like.
DR InterPro; IPR031176; ELL/occludin.
DR InterPro; IPR019464; ELL_N.
DR InterPro; IPR010844; Occludin_ELL.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR23288; OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL; 1.
DR PANTHER; PTHR23288:SF9; RNA POLYMERASE II ELONGATION FACTOR ELL; 1.
DR Pfam; PF10390; ELL; 1.
DR Pfam; PF07303; Occludin_ELL; 1.
DR SUPFAM; SSF144292; occludin/ELL-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51980; OCEL; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000242638};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 509..619
FT /note="OCEL"
FT /evidence="ECO:0000259|PROSITE:PS51980"
FT REGION 310..388
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 405..494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 328..342
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 405..429
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 456..479
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 627 AA; 71008 MW; 31F06BB73CF95C57 CRC64;
MTALREKQCY GLSSGKLDLG GNVSVFHVKL TDSAARAIGT FQNGKSWSSR PTITFSGNQG
RIAVPCSENG NEARIFTFGV TIVARNSPHG SFDCVKQHDA GAAEELTCLG VIQKKMTVNA
TDDSYDKARQ SMAQAEEETR SRGAIVIKNS ARYQGKKVTV RAPAPALAKL TKPKHSSHSL
LNNIKKGASL PRQRKGPCPV NRKSVGDVGE RPLRERVMHL LALRPYKRPE LILRLQKDGM
ADGDKDVLDA VMVEVGQLSN RDSTFVLKDG LYKELQKDWP GYTSGDQQLL KRILVRRLFQ
PQQNLLTVPE AQVSPLRETP NSSPAHRPKH SLLDEYADPL ASKKPRISHL TGKSPSENFR
LRSSKQEAQK GAEAAAAEDG RNNSLDPKRL FDSLSAVCQQ EAEVAKRLEQ TDAPQEEPRD
PEEQQKPKSD RPPLPLMVPD LSRHTVKKKK SKHKRKDHQE KEEWRDKKQR RKDKDCSPDY
SNNDAPLQRT ETSKLMFDSN VPQVDTDSAD YLSKYAAISS HSQRQSYKLD FNKEYSEYRD
LHARIDSVTQ QFMDLDTQLK QLHHESHKYK TVRNKILQEY RKIKKSNPNY NQDKVRCEYL
HNKLAHIKKL ISDFDQQQIT VDHSGPK
//
