ID A0A3Q1M1Q8_BOVIN Unreviewed; 1485 AA.
AC A0A3Q1M1Q8;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Arginine-glutamic acid dipeptide repeats {ECO:0000313|Ensembl:ENSBTAP00000061996.1};
GN Name=RERE {ECO:0000313|Ensembl:ENSBTAP00000061996.1,
GN ECO:0000313|VGNC:VGNC:33872};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000061996.1, ECO:0000313|Proteomes:UP000009136};
RN [1] {ECO:0000313|Ensembl:ENSBTAP00000061996.1, ECO:0000313|Proteomes:UP000009136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000061996.1,
RC ECO:0000313|Proteomes:UP000009136};
RA Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT "ARS-UCD1.2.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSBTAP00000061996.1}
RP IDENTIFICATION.
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000061996.1};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR Ensembl; ENSBTAT00000075404.1; ENSBTAP00000061996.1; ENSBTAG00000018272.5.
DR VEuPathDB; HostDB:ENSBTAG00000018272; -.
DR VGNC; VGNC:33872; RERE.
DR GeneTree; ENSGT00940000153615; -.
DR Proteomes; UP000009136; Chromosome 16.
DR Bgee; ENSBTAG00000018272; Expressed in pigment epithelium of eye and 105 other cell types or tissues.
DR ExpressionAtlas; A0A3Q1M1Q8; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd04709; BAH_MTA; 1.
DR CDD; cd11661; SANT_MTA3_like; 1.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 2.30.30.490; -; 1.
DR Gene3D; 4.10.1240.50; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR017993; Atrophin-1.
DR InterPro; IPR002951; Atrophin-like.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR000949; ELM2_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR000679; Znf_GATA.
DR PANTHER; PTHR13859:SF12; ARGININE-GLUTAMIC ACID DIPEPTIDE REPEATS PROTEIN; 1.
DR PANTHER; PTHR13859; ATROPHIN-RELATED; 1.
DR Pfam; PF03154; Atrophin-1; 2.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF01448; ELM2; 1.
DR Pfam; PF00320; GATA; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR PRINTS; PR01222; ATROPHIN.
DR SMART; SM00439; BAH; 1.
DR SMART; SM01189; ELM2; 1.
DR SMART; SM00717; SANT; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51038; BAH; 1.
DR PROSITE; PS51156; ELM2; 1.
DR PROSITE; PS51293; SANT; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000009136};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 103..241
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 242..345
FT /note="ELM2"
FT /evidence="ECO:0000259|PROSITE:PS51156"
FT DOMAIN 349..401
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 1..90
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 491..1031
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1074..1141
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..38
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..75
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 505..520
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 554..575
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 576..619
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 620..636
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 637..656
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 657..689
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 729..753
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..847
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 878..901
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 924..963
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1074..1108
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1485 AA; 163846 MW; AD23D1630721E399 CRC64;
MTADKDKDKD KEKDRDRDRD REREKRDKVR ESENSRPRRS CTLEGGAKNY AESDHSEDED
NDNNSATTEE STKKNKKKPP KKKSRYERTD TGEITSYITE DDVVYRPGDC VYIESRRPNT
PYFICSIQDF KLSKRDHLLM NVKWYYRQSE VPDSVYQHLV QDRHNENDSG RELVITDPVI
KNRELFISDY VDTYHAAALR GKCNISHFSD IFAAREFKAR VDSFFYILGY NPETRRLNST
QGEIRVGPSH QAKLPDLQPF PSPDGDTVTQ HEELVWMPGV NDCDLLMYLR AARSMAAFAG
MCDGGSTEDG CVAASRDDTT LNALNTLHES GYDAGKALQR LVKKPVPKLI EKSWTEDEVK
RFVKGLRQYG KNFFRIRKEL LPNKETGELI TFYYYWKKTP EAASSRAHRR HRRQAVFRRI
KTRTASTPVN TPSRPPSSEF CKWGLCTRHK LPCPSSGWTC SHTSKDWHHG GRENILLCTD
CRIHFKKYGE LPPIEKPVDP PPFMFKPVKE EDDGLSGKHS MRTRRSRGSM STLRSGRKKQ
PASPDGRASP INEDIRSSGR NSPSAASTSS NDSKAETVKK SAKKVKEEAT SPLKSTKRQR
EKGTSDTEEA DRTSSKKTKT QEISRPNSPS EGEGESSDSR SVNDEGSSDP KDIDQDNRST
SPSIPSPQDN ESDSDSSAQQ TTQPSALQAP GGATPAPSSA LPGTAQLPTQ GPTPAPAGPS
QGSPSASQPP TQPQAPALHP QRLASPHPPL QPLTGPAGQT TGPPHTQPPL HSQGPPGPHG
LQAGSLLQHP GPPQPFGLPP QVSQAAPQQP PREQPLPPAP LAMPHIKPPP TTPIPQLPAP
QAHKHPPHLS GPSPFSMNAN LPPPPALKPL SSLSTHHPPS AHPPPLQLMP QSQPLPSSPA
QPPVLTQSQG LPPAATSHPA TGLHQVPPQP PFAQHPFVPG GPPPITPPTC PSTSTPPAGS
GPSAQPPCSA AVSSGGSVPG GATCPLPTVQ IKEEALDDAE EPESPPPPPR SPSPEPTVVD
TPSHASQSAR FYKHLDRGYN SCARTDLYFM PLAGSKLAKK REEAIEKAKR EAEQKAREER
EREKEKEKER EREREREREA ERAAKASSSA HEGRLSDPQL GGPGHMRPSF EPPPTTIAAV
PPYIGPDTPA LRTLSEYARP HVMSPTNRNH PFYVPLNPTD PLLAYHMPGL YNVDPTIRER
ELREREIRER ELRERELRER MKPGFEVKPP ELDPLHPAAN PMEHFARHGA LTIPPAAGPH
PFASFHPGLN PLERERLALA GPQLRPEMSY PDRLAAERIH AERMASLTSD PLARLQMFNV
TPHHHQHSHI HSHLHLHQQD PLHQGGTCNV PGIALLNPVL LPPFLGSAGP VHPLVDPLTA
GPHLARFPYP PGTLPNPLLG QPPHEHEMLR HPVFGTPYPR DLPGAIPPPM SAAHQLQAMH
AQSAELQRLA MEQQWLHGHP HMHGGHLPSQ EDYYSRLKKE GDKQL
//