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Database: UniProt
Entry: A0A3Q1M1Q8_BOVIN
LinkDB: A0A3Q1M1Q8_BOVIN
Original site: A0A3Q1M1Q8_BOVIN 
ID   A0A3Q1M1Q8_BOVIN        Unreviewed;      1485 AA.
AC   A0A3Q1M1Q8;
DT   10-APR-2019, integrated into UniProtKB/TrEMBL.
DT   10-APR-2019, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   SubName: Full=Arginine-glutamic acid dipeptide repeats {ECO:0000313|Ensembl:ENSBTAP00000061996.1};
GN   Name=RERE {ECO:0000313|Ensembl:ENSBTAP00000061996.1,
GN   ECO:0000313|VGNC:VGNC:33872};
OS   Bos taurus (Bovine).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
OX   NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000061996.1, ECO:0000313|Proteomes:UP000009136};
RN   [1] {ECO:0000313|Ensembl:ENSBTAP00000061996.1, ECO:0000313|Proteomes:UP000009136}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000061996.1,
RC   ECO:0000313|Proteomes:UP000009136};
RA   Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA   Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA   Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT   "ARS-UCD1.2.";
RL   Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSBTAP00000061996.1}
RP   IDENTIFICATION.
RC   STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000061996.1};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   Ensembl; ENSBTAT00000075404.1; ENSBTAP00000061996.1; ENSBTAG00000018272.5.
DR   VEuPathDB; HostDB:ENSBTAG00000018272; -.
DR   VGNC; VGNC:33872; RERE.
DR   GeneTree; ENSGT00940000153615; -.
DR   Proteomes; UP000009136; Chromosome 16.
DR   Bgee; ENSBTAG00000018272; Expressed in pigment epithelium of eye and 105 other cell types or tissues.
DR   ExpressionAtlas; A0A3Q1M1Q8; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd04709; BAH_MTA; 1.
DR   CDD; cd11661; SANT_MTA3_like; 1.
DR   CDD; cd00202; ZnF_GATA; 1.
DR   Gene3D; 2.30.30.490; -; 1.
DR   Gene3D; 4.10.1240.50; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR017993; Atrophin-1.
DR   InterPro; IPR002951; Atrophin-like.
DR   InterPro; IPR001025; BAH_dom.
DR   InterPro; IPR043151; BAH_sf.
DR   InterPro; IPR000949; ELM2_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001005; SANT/Myb.
DR   InterPro; IPR017884; SANT_dom.
DR   InterPro; IPR000679; Znf_GATA.
DR   PANTHER; PTHR13859:SF12; ARGININE-GLUTAMIC ACID DIPEPTIDE REPEATS PROTEIN; 1.
DR   PANTHER; PTHR13859; ATROPHIN-RELATED; 1.
DR   Pfam; PF03154; Atrophin-1; 2.
DR   Pfam; PF01426; BAH; 1.
DR   Pfam; PF01448; ELM2; 1.
DR   Pfam; PF00320; GATA; 1.
DR   Pfam; PF00249; Myb_DNA-binding; 1.
DR   PRINTS; PR01222; ATROPHIN.
DR   SMART; SM00439; BAH; 1.
DR   SMART; SM01189; ELM2; 1.
DR   SMART; SM00717; SANT; 1.
DR   SMART; SM00401; ZnF_GATA; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS51038; BAH; 1.
DR   PROSITE; PS51156; ELM2; 1.
DR   PROSITE; PS51293; SANT; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009136};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT   DOMAIN          103..241
FT                   /note="BAH"
FT                   /evidence="ECO:0000259|PROSITE:PS51038"
FT   DOMAIN          242..345
FT                   /note="ELM2"
FT                   /evidence="ECO:0000259|PROSITE:PS51156"
FT   DOMAIN          349..401
FT                   /note="SANT"
FT                   /evidence="ECO:0000259|PROSITE:PS51293"
FT   REGION          1..90
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          491..1031
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1074..1141
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..38
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        50..75
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        505..520
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        554..575
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        576..619
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        620..636
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        637..656
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        657..689
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        729..753
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        792..847
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        878..901
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        924..963
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1074..1108
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1485 AA;  163846 MW;  AD23D1630721E399 CRC64;
     MTADKDKDKD KEKDRDRDRD REREKRDKVR ESENSRPRRS CTLEGGAKNY AESDHSEDED
     NDNNSATTEE STKKNKKKPP KKKSRYERTD TGEITSYITE DDVVYRPGDC VYIESRRPNT
     PYFICSIQDF KLSKRDHLLM NVKWYYRQSE VPDSVYQHLV QDRHNENDSG RELVITDPVI
     KNRELFISDY VDTYHAAALR GKCNISHFSD IFAAREFKAR VDSFFYILGY NPETRRLNST
     QGEIRVGPSH QAKLPDLQPF PSPDGDTVTQ HEELVWMPGV NDCDLLMYLR AARSMAAFAG
     MCDGGSTEDG CVAASRDDTT LNALNTLHES GYDAGKALQR LVKKPVPKLI EKSWTEDEVK
     RFVKGLRQYG KNFFRIRKEL LPNKETGELI TFYYYWKKTP EAASSRAHRR HRRQAVFRRI
     KTRTASTPVN TPSRPPSSEF CKWGLCTRHK LPCPSSGWTC SHTSKDWHHG GRENILLCTD
     CRIHFKKYGE LPPIEKPVDP PPFMFKPVKE EDDGLSGKHS MRTRRSRGSM STLRSGRKKQ
     PASPDGRASP INEDIRSSGR NSPSAASTSS NDSKAETVKK SAKKVKEEAT SPLKSTKRQR
     EKGTSDTEEA DRTSSKKTKT QEISRPNSPS EGEGESSDSR SVNDEGSSDP KDIDQDNRST
     SPSIPSPQDN ESDSDSSAQQ TTQPSALQAP GGATPAPSSA LPGTAQLPTQ GPTPAPAGPS
     QGSPSASQPP TQPQAPALHP QRLASPHPPL QPLTGPAGQT TGPPHTQPPL HSQGPPGPHG
     LQAGSLLQHP GPPQPFGLPP QVSQAAPQQP PREQPLPPAP LAMPHIKPPP TTPIPQLPAP
     QAHKHPPHLS GPSPFSMNAN LPPPPALKPL SSLSTHHPPS AHPPPLQLMP QSQPLPSSPA
     QPPVLTQSQG LPPAATSHPA TGLHQVPPQP PFAQHPFVPG GPPPITPPTC PSTSTPPAGS
     GPSAQPPCSA AVSSGGSVPG GATCPLPTVQ IKEEALDDAE EPESPPPPPR SPSPEPTVVD
     TPSHASQSAR FYKHLDRGYN SCARTDLYFM PLAGSKLAKK REEAIEKAKR EAEQKAREER
     EREKEKEKER EREREREREA ERAAKASSSA HEGRLSDPQL GGPGHMRPSF EPPPTTIAAV
     PPYIGPDTPA LRTLSEYARP HVMSPTNRNH PFYVPLNPTD PLLAYHMPGL YNVDPTIRER
     ELREREIRER ELRERELRER MKPGFEVKPP ELDPLHPAAN PMEHFARHGA LTIPPAAGPH
     PFASFHPGLN PLERERLALA GPQLRPEMSY PDRLAAERIH AERMASLTSD PLARLQMFNV
     TPHHHQHSHI HSHLHLHQQD PLHQGGTCNV PGIALLNPVL LPPFLGSAGP VHPLVDPLTA
     GPHLARFPYP PGTLPNPLLG QPPHEHEMLR HPVFGTPYPR DLPGAIPPPM SAAHQLQAMH
     AQSAELQRLA MEQQWLHGHP HMHGGHLPSQ EDYYSRLKKE GDKQL
//
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