ID A0A3Q1ME35_BOVIN Unreviewed; 246 AA.
AC A0A3Q1ME35;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=L1 transposable element RRM domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000069239.1, ECO:0000313|Proteomes:UP000009136};
RN [1] {ECO:0000313|Ensembl:ENSBTAP00000069239.1, ECO:0000313|Proteomes:UP000009136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000069239.1,
RC ECO:0000313|Proteomes:UP000009136};
RA Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT "ARS-UCD1.2.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSBTAP00000069239.1}
RP IDENTIFICATION.
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000069239.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3Q1ME35; -.
DR SMR; A0A3Q1ME35; -.
DR STRING; 9913.ENSBTAP00000069239; -.
DR Ensembl; ENSBTAT00000086195.1; ENSBTAP00000069239.1; ENSBTAG00000049926.1.
DR VEuPathDB; HostDB:ENSBTAG00000049926; -.
DR GeneTree; ENSGT01050000244986; -.
DR InParanoid; A0A3Q1ME35; -.
DR OMA; LMMMIED; -.
DR Proteomes; UP000009136; Chromosome 24.
DR Bgee; ENSBTAG00000049926; Expressed in cumulus cell and 60 other cell types or tissues.
DR GO; GO:1990904; C:ribonucleoprotein complex; IBA:GO_Central.
DR GO; GO:0003727; F:single-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0032197; P:retrotransposition; IBA:GO_Central.
DR Gene3D; 3.30.250.20; L1 transposable element, C-terminal domain; 1.
DR Gene3D; 3.30.70.1820; L1 transposable element, RRM domain; 1.
DR Gene3D; 1.20.5.390; L1 transposable element, trimerization domain; 1.
DR InterPro; IPR042566; L1_C.
DR InterPro; IPR035300; L1_dsRBD.
DR InterPro; IPR043636; L1_RRM_dom.
DR InterPro; IPR035301; L1_trimer.
DR InterPro; IPR004244; Transposase_22.
DR PANTHER; PTHR11505; L1 TRANSPOSABLE ELEMENT-RELATED; 1.
DR PANTHER; PTHR11505:SF216; LINE-1 RETROTRANSPOSABLE ELEMENT ORF1 PROTEIN; 1.
DR Pfam; PF17490; Tnp_22_dsRBD; 1.
DR Pfam; PF17489; Tnp_22_trimer; 1.
DR Pfam; PF02994; Transposase_22; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000009136}.
FT DOMAIN 40..77
FT /note="L1 transposable element trimerization"
FT /evidence="ECO:0000259|Pfam:PF17489"
FT DOMAIN 81..177
FT /note="L1 transposable element RRM"
FT /evidence="ECO:0000259|Pfam:PF02994"
FT DOMAIN 181..244
FT /note="L1 transposable element dsRBD-like"
FT /evidence="ECO:0000259|Pfam:PF17490"
FT COILED 23..85
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 246 AA; 29462 MW; 5F00F0E31EA37BF9 CRC64;
MQERFNKDLE EIKKSQYIMN NAINEIKNTL EATNSRLTEA EDRISELEDR MVEINESERI
KEKRIKRNED NLRDLQDNIK RYNIRIIGVP EEEDKKKDHE KILEEIIVEN FPKMGKEIIT
QVQETQRVPN RINPRRNTPR HILIKLTKIK HKEQILKAAR EKQQITHKGI PIRITADLSI
ETLQARREWQ DILKMMKENN LQPRLLYPAR ISFKYEGEIK SFSDKQKLRE FCTTKPALQQ
ILKDIL
//
