ID A0A3Q1MHA1_BOVIN Unreviewed; 1425 AA.
AC A0A3Q1MHA1;
DT 10-APR-2019, integrated into UniProtKB/TrEMBL.
DT 10-APR-2019, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=SKI3 subunit of superkiller complex {ECO:0000313|Ensembl:ENSBTAP00000070609.1};
GN Name=SKIC3 {ECO:0000313|Ensembl:ENSBTAP00000070609.1,
GN ECO:0000313|VGNC:VGNC:36473};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000070609.1, ECO:0000313|Proteomes:UP000009136};
RN [1] {ECO:0000313|Ensembl:ENSBTAP00000070609.1, ECO:0000313|Proteomes:UP000009136}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000070609.1,
RC ECO:0000313|Proteomes:UP000009136};
RA Rosen B.D., Bickhart D.M., Koren S., Schnabel R.D., Hall R., Zimin A.,
RA Dreischer C., Schultheiss S., Schroeder S.G., Elsik C.G., Couldrey C.,
RA Liu G.E., Van Tassell C.P., Phillippy A.M., Smith T.P.L., Medrano J.F.;
RT "ARS-UCD1.2.";
RL Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSBTAP00000070609.1}
RP IDENTIFICATION.
RC STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000070609.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR Ensembl; ENSBTAT00000068665.1; ENSBTAP00000070609.1; ENSBTAG00000009131.6.
DR VEuPathDB; HostDB:ENSBTAG00000009131; -.
DR VGNC; VGNC:36473; SKIC3.
DR GeneTree; ENSGT00390000016407; -.
DR Proteomes; UP000009136; Chromosome 7.
DR Bgee; ENSBTAG00000009131; Expressed in spiral colon and 111 other cell types or tissues.
DR ExpressionAtlas; A0A3Q1MHA1; baseline and differential.
DR GO; GO:0055087; C:Ski complex; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR039226; Ski3/TTC37.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR15704; SUPERKILLER 3 PROTEIN-RELATED; 1.
DR PANTHER; PTHR15704:SF7; TETRATRICOPEPTIDE REPEAT PROTEIN 37; 1.
DR Pfam; PF13432; TPR_16; 2.
DR Pfam; PF14559; TPR_19; 1.
DR Pfam; PF13181; TPR_8; 2.
DR SMART; SM00028; TPR; 12.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF48452; TPR-like; 5.
DR PROSITE; PS50005; TPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000009136};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 59..92
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 334..367
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 478..511
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 512..545
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 775..808
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 1425 AA; 159284 MW; C51F8A710AE4A0E9 CRC64;
IRINPLPLFK YKQAFCFDRM SSKEVKTALK SARDAIRNKE YKEALKHCKT VLKQEKNNYN
AWVFIGVAAA ELEQPDQAQG AYKKAAELEP DQLLAWQGLA SLYEKCNHIN AKDDLPGVAR
TWHKLIKTRQ EEGADNQELH QLWRKLTQLL AECTEDQNNE TQQLLLTAFE NALGLSDKIP
SEDHQVLYKH FIQCLSKFPH ETARLKKACE GMINIYPTVQ YPLEVLCLHL IESEQYCCRL
VEMDPQSGTG LIGLGIKALQ DKKYEDAVRN LTEGKSGWYH LAEAQVRMHK PKEAVSDANN
IPGLLVLKGL AYLNKGSLDE ASKVDLLSSY PDLTEVHALE ALIHFTKKDY LQAEKCFQQA
LEKDPEVAEY HYQLGLTYWS MGEEARKDKT KALTHFLKAA KLDTYMGKVF CYLGHYYKDV
VGDKNRARGC YRKAFELDDT DAESGAAAVD LSVELEEMET ALAILTTVTQ KASAGTAKWA
WLRRGLYYLK AGQHSQAVAD LQAALRADPK DFNCWESLGE AYLSRGGYTT ALKSFTKASE
LNPESTYSVF KVAAIQQTLG KYKEAVAQYQ LIIKKKEDYV PALKGLGECH LLLAKAALVD
YLDGKAVDYI EKALEYFTRA LQHRADVSCL WKLVGDACTS LSAVSPSKVN VSVLGVLLGQ
KEGKQVLKKN ELLHLGGRCY GRALKLMSTS NTWCDLGINY YRQAQHLADT GSNSDDLQEL
LEKSMHCLKK AVRLDSNNHL YWNALGVVSC YSGIGNYALA QHCFIKSIQS EQINAVAWTN
LGVLYLANEK IEQAHEAFKM AQSLDPSYLM CWIGQALIAE TVGSYDTMDL FRHTTELSMH
TEGAIGYAYW VCTTLQDKSN RDTELYRYNI LQMNAIPAAQ VVLSKYVERI QNYAPAFTML
GYLNEHLQLK KEAANAYHSY VLLLSSIGEY DKAIQAFKST PLEELEDIIG FALALFMKGL
YKESSKAYER ALTIVESEQD KAHILTALAI AEYKQGKTDV AKTLLFKCSI LKEPTTESLQ
ALCALGLAMQ DATLSKAALN ELLKHSKPNS DYQRSLLTSA ICALQGRSVA VQRQASKAVH
SNPADPALWS LLSRVVAQYT QRNAKVICNI NSAEDEKNTA LKTIQKAALL SPGDPAVWAG
LMAACHADDI LALVSSTQPK RMDLYLALLS AVSASKFFEN YNQSLERWSL SQAVTGLIDT
GRISKAEALC TKNLKSNPDQ PAIILLLRQV QCKPLLESRK PLPDTVLEEL QKTVMSNSTS
VPAWQWLAHI YQSQGMMGAA EMCYRKSLQV ASQQGSWSGK LSSLLRLALL ALEVCMANVS
NAHWPSLVQE ATAEALKLCF CPLAVLLQAL LQFKRKMGAR ETRRLLERVV YQPGYPKSIV
STARWYLLRH LHAKNDYELI DVLVNNAKTH GDTRALELNQ KLSSE
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